Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.5e-32 142.1 66 100.0
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 7.5e-32 139.8 66 98.5
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.3e-28 129.0 67 89.6
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 6.5e-28 126.7 62 90.3
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.1e-27 125.9 63 87.3
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.1e-27 125.9 65 86.2
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 1.5e-27 125.6 63 92.1
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.5e-27 125.6 66 86.4
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 2.5e-27 124.8 62 88.7
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 2.5e-27 124.8 61 91.8
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 4.2e-27 124.0 63 85.7
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 4.2e-27 124.0 63 85.7
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 5.5e-27 123.6 65 86.2
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 9.4e-27 122.9 60 91.7
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 9.4e-27 122.9 66 86.4
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.2e-26 122.5 62 87.1
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 1.6e-26 122.1 63 84.1
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 2.1e-26 121.7 66 84.8
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 4.7e-26 120.6 62 88.7
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 1.0e-25 119.4 62 87.1
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.4e-25 119.0 62 87.1
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.4e-25 119.0 62 87.1
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 1.8e-25 118.6 62 85.5
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 87.3
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 3.0e-25 117.9 62 87.1
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.0e-25 117.5 59 89.8
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.0e-25 117.5 59 89.8
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 8.8e-25 116.3 59 88.1
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.8e-25 116.3 59 88.1
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 8.8e-25 116.3 64 81.2
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 8.8e-25 116.3 62 85.5
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 79.7
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 79.7
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.2e-24 115.9 66 80.3
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.5e-24 115.5 62 79.0
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 1.5e-24 115.5 62 85.5
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.5e-24 115.5 65 84.6
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.5e-24 115.5 65 84.6
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 2.0e-24 115.2 62 82.3
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 2.0e-24 115.2 64 79.7
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 2.0e-24 115.2 63 81.0
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.6e-24 114.8 66 74.2
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 3.4e-24 114.4 62 82.3
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 3.4e-24 114.4 62 82.3
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 3.4e-24 114.4 62 85.5
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 3.4e-24 114.4 61 83.6
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 3.4e-24 114.4 63 79.4
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 4.4e-24 114.0 65 78.5
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 5.7e-24 113.6 62 82.3
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 5.7e-24 113.6 62 82.3
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 80.6
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 80.6
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 80.6
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 80.6
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 80.6
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 79.0
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 80.6
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 82.3
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 9.8e-24 112.8 65 80.0
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 9.8e-24 112.8 62 80.6
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 80.6
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.3e-23 112.5 63 77.8
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 61 82.0
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.3e-23 112.5 57 86.0
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 79.0
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 79.0
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.7e-23 112.1 62 79.0
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 2.8e-23 111.3 59 83.1
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.8e-23 111.3 61 80.3
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 3.7e-23 110.9 59 83.1
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 4.8e-23 110.5 66 77.3
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 4.8e-23 110.5 66 77.3
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 6.3e-23 110.2 63 81.0
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 1.1e-22 109.4 55 87.3
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 2.4e-22 108.2 59 79.7
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 5.4e-22 107.1 62 75.8
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 1.2e-21 105.9 62 77.4
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.2e-21 105.9 63 73.0
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.6e-21 105.5 66 71.2
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 1.6e-21 105.5 55 85.5
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.0e-20 102.8 60 80.0
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 8.6e-20 99.8 63 74.6
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 5.5e-19 97.1 65 64.6
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.2e-18 95.9 60 73.3
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.4e-17 92.4 63 69.8
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 6.8e-17 90.1 63 68.3
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 2.0e-16 88.6 44 86.4
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 9.2e-14 79.7 47 72.3
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 2.9e-12 74.7 39 84.6
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 9.5e-11 69.7 57 54.4
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 2.1e-10 68.6 36 83.3
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.1e-10 68.6 36 83.3
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.8e-10 68.2 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.8e-10 68.2 36 83.3
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.7e-10 67.4 59 50.8
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.7e-10 67.4 59 50.8
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 6.1e-10 67.0 36 77.8
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 3.1e-09 64.7 41 68.3
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 1.5e-08 62.4 54 50.0


User provided reference genes

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