Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 8.8e-288 993.0 543 100.0
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.2e-260 902.9 545 89.7
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 2.0e-170 603.2 543 62.6
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 7.4e-170 601.3 460 75.4
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 5.0e-158 562.0 458 71.8
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 5.2e-155 552.0 541 59.3
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 4.4e-154 548.9 542 59.4
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 3.3e-149 532.7 548 56.8
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 7.5e-146 521.5 541 56.2
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 4.1e-144 515.8 539 56.4
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 1.0e-142 511.1 540 55.6
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 3.9e-142 509.2 542 55.9
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.9e-141 506.9 549 55.2
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 3.1e-139 499.6 459 63.4
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 6.8e-139 498.4 552 55.1
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 5.8e-138 495.4 547 53.4
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 7.5e-138 495.0 544 56.4
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 1.1e-136 491.1 548 55.1
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 9.2e-136 488.0 541 55.5
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 2.7e-135 486.5 542 53.0
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 3.9e-134 482.6 550 53.6
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 4.3e-133 479.2 540 52.4
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.1e-132 476.9 550 53.5
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.3e-131 473.4 545 52.5
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 5.2e-131 472.2 543 52.1
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 6.8e-131 471.9 545 52.7
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 8.9e-131 471.5 550 52.4
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.3e-129 467.6 540 51.3
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 9.2e-128 461.5 543 51.9
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 7.3e-125 451.8 524 54.4
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 6.2e-124 448.7 525 51.0
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 4.1e-120 436.0 540 48.3
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 5.4e-120 435.6 455 56.7
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 2.1e-119 433.7 553 50.6
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 2.7e-119 433.3 547 48.6
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.5e-117 427.6 543 49.7
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 2.5e-117 426.8 540 50.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 7.6e-114 415.2 544 48.5
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 9.9e-114 414.8 552 47.1
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 2.2e-113 413.7 542 46.7
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 2.4e-112 410.2 539 46.4
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 4.6e-111 406.0 539 45.8
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 8.7e-110 401.7 544 45.8
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 8.7e-110 401.7 568 46.7
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 1.1e-109 401.4 537 47.3
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 3.3e-109 399.8 550 45.8
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 4.8e-108 396.0 539 45.5
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 8.1e-108 395.2 543 45.1
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 1.1e-107 394.8 546 43.8
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 1.4e-107 394.4 537 46.9
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 5.8e-106 389.0 544 44.9
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 8.4e-105 385.2 464 51.1
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.4e-104 384.4 542 43.0
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 2.1e-103 380.6 547 44.2
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 3.5e-103 379.8 553 44.7
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 3.5e-103 379.8 552 45.5
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 3.5e-103 379.8 542 44.3
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 6.0e-103 379.0 551 42.5
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.1e-101 374.8 543 44.4
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 9.6e-101 371.7 539 43.8
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 1.3e-100 371.3 541 44.2
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.8e-100 370.2 542 45.0
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.8e-100 369.4 542 45.0
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 3.5e-95 353.2 374 57.0
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 1.8e-94 350.9 538 42.6
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 3.4e-90 336.7 545 40.9
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 3.4e-90 336.7 545 40.9
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 3.2e-88 330.1 378 52.4
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 4.2e-88 329.7 491 45.6
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 5.5e-88 329.3 540 40.6
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 7.1e-88 328.9 534 41.2
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 7.1e-88 328.9 349 56.2
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 4.6e-87 326.2 253 70.4
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 4.8e-84 316.2 335 56.7
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 8.2e-84 315.5 326 58.6
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 6.9e-83 312.4 456 43.4
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.2e-82 311.6 370 50.8
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.6e-82 310.5 483 42.4
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 3.4e-82 310.1 316 58.5
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 7.6e-82 308.9 602 35.9
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 8.4e-81 305.4 555 39.8
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 7.2e-80 302.4 280 62.1
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.2e-79 301.6 245 68.2
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 1.8e-78 297.7 452 42.7
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 5.7e-77 292.7 450 42.9
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 7.4e-77 292.4 274 60.2
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 3.4e-74 283.5 401 45.4
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.7e-73 281.2 450 42.7
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 9.4e-64 248.8 589 31.7
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 1.2e-63 248.4 308 46.8
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.0e-62 245.4 367 44.4
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 5.1e-62 243.0 367 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 2.4e-59 234.2 619 30.5
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.9e-57 227.3 251 55.4
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.5e-56 224.2 467 35.1
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.6e-55 221.5 147 78.2
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 6.3e-44 183.0 244 43.4
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 9.5e-32 142.5 87 77.0
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 4.7e-31 140.2 411 32.4
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 4.1e-27 127.1 113 57.5
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.4e-19 100.1 81 60.5
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 2.7e-18 97.8 169 43.8
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.0e-17 95.9 87 50.6
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 4.7e-15 87.0 66 62.1
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 6.0e-10 70.1 75 57.3
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.3e-09 68.2 62 58.1


User provided reference genes

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