Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 0.0e+00 1167.5 617 100.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.3e-295 1019.2 553 98.2
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.6e-264 915.2 558 86.7
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 7.2e-262 907.1 558 86.9
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 5.7e-243 844.3 558 79.0
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.4e-241 839.0 558 78.9
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 4.3e-238 828.2 558 76.9
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.1e-237 825.9 558 77.6
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.2e-235 820.1 558 75.6
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.6e-235 818.9 558 75.1
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.4e-235 818.5 558 76.5
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.9e-234 815.5 558 75.1
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.7e-234 815.1 558 76.3
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.9e-233 812.8 558 76.5
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.0e-232 809.3 559 76.7
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.7e-231 806.2 558 77.6
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 3.0e-231 805.4 559 75.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.5e-230 802.4 558 75.3
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 9.5e-230 800.4 558 76.7
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-229 800.0 558 77.1
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.6e-229 799.7 558 78.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.1e-228 797.0 558 75.3
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 8.9e-228 793.9 558 75.1
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.0e-227 792.7 558 76.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.2e-226 789.3 563 73.9
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.9e-226 788.9 573 74.5
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.1e-225 786.9 558 75.3
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 7.8e-224 780.8 558 73.8
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 8.6e-223 777.3 558 75.6
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.1e-222 776.9 560 72.7
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 1.5e-222 776.5 558 73.1
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.3e-222 775.4 558 73.5
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.1e-221 772.7 558 73.8
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 6.2e-221 771.2 558 72.8
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.8e-220 769.6 558 72.0
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.2e-219 766.9 559 71.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 4.4e-219 765.0 558 71.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 7.5e-219 764.2 558 72.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 9.9e-219 763.8 560 71.1
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 8.3e-218 760.8 582 68.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.1e-217 760.4 558 70.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.4e-217 760.0 558 72.0
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.2e-216 756.9 558 71.9
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.2e-216 756.9 558 70.8
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 2.1e-216 756.1 559 72.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.5e-214 750.0 559 70.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 9.6e-214 747.3 559 71.4
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.4e-212 742.7 630 64.9
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 3.4e-211 738.8 558 69.7
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.3e-210 736.9 559 69.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 6.4e-210 734.6 558 70.6
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 9.3e-209 730.7 558 69.5
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 6.0e-208 728.0 559 67.8
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.0e-207 727.2 569 68.9
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.8e-204 716.5 559 67.8
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 9.0e-204 714.1 559 66.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 3.4e-203 712.2 555 69.9
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 7.6e-203 711.1 559 66.5
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.3e-202 710.3 578 64.5
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.1e-201 707.2 559 67.3
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 7.1e-201 704.5 558 68.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.2e-200 703.7 559 66.2
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.2e-200 703.7 558 68.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 4.6e-200 701.8 558 67.4
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 6.0e-200 701.4 560 67.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.7e-199 699.9 558 67.9
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 3.3e-198 695.7 562 64.9
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.8e-197 692.6 558 67.2
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.1e-196 690.6 559 65.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.8e-196 689.9 558 67.0
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.8e-196 689.9 559 66.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 5.3e-196 688.3 560 66.8
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.0e-195 686.4 558 66.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.7e-194 683.3 559 65.7
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.2e-193 679.1 559 64.4
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 4.2e-193 678.7 559 65.1
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 5.6e-190 668.3 560 65.2
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 7.4e-190 667.9 516 69.2
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 6.2e-189 664.8 559 64.9
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 5.5e-185 651.7 559 64.4
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 3.7e-181 639.0 558 63.3
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 3.7e-181 639.0 558 63.3
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.1e-180 637.5 558 63.1
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 6.9e-180 634.8 558 62.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 6.9e-180 634.8 558 62.9
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.5e-179 633.6 509 66.8
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.4e-179 632.5 528 63.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.3e-178 630.6 564 62.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.5e-177 625.2 559 61.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.8e-173 612.8 485 67.4
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.4e-172 609.8 571 57.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 3.4e-171 605.9 562 58.0
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 4.2e-169 599.0 563 56.1
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.4e-167 594.0 527 61.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 5.1e-167 592.0 627 53.9
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.7e-149 533.9 413 66.6
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.0e-126 457.2 415 63.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.9e-123 445.7 442 58.1
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.2e-118 431.4 579 43.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 9.5e-113 411.8 556 43.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 4.0e-103 379.8 288 73.3
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 4.4e-102 376.3 574 38.7
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 4.4e-102 376.3 237 80.2
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.4e-100 371.3 224 79.5
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 2.6e-94 350.5 593 38.1
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.9e-93 346.3 564 38.5
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 4.2e-92 343.2 303 63.7
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 3.5e-91 340.1 247 76.1
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 3.9e-74 283.5 264 57.2
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.5e-68 264.2 380 47.6
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 9.3e-68 262.3 174 69.0
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.4e-55 221.9 152 77.0
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 4.8e-48 196.8 233 52.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 4.5e-46 190.3 588 27.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 5.3e-39 166.8 142 70.4
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 2.6e-33 147.9 151 54.3
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.5e-28 130.2 71 83.1
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 5.4e-15 87.0 56 83.9
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 5.2e-10 70.5 64 57.8
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 8.9e-10 69.7 48 70.8


User provided reference genes

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