Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 6.4e-296 1020.0 514 100.0
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 2.2e-256 888.6 503 91.3
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 8.2e-219 763.8 504 76.2
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.7e-216 756.1 509 76.4
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 3.9e-213 745.0 493 76.1
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 4.2e-207 724.9 503 73.2
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 1.6e-206 723.0 502 72.3
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 3.6e-206 721.8 504 73.0
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 8.0e-206 720.7 500 73.8
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 2.3e-205 719.2 502 73.3
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 7.7e-201 704.1 463 74.5
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 2.4e-194 682.6 508 68.9
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 7.7e-193 677.6 499 69.1
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 5.0e-192 674.9 499 69.1
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 2.1e-190 669.5 500 67.4
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 6.3e-187 657.9 566 60.8
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 1.0e-181 640.6 489 66.7
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 1.4e-181 640.2 478 66.3
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 3.1e-181 639.0 511 64.4
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 3.0e-176 622.5 460 67.2
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.4e-165 587.0 480 64.4
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 6.8e-165 584.7 476 61.1
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 7.6e-164 581.3 487 60.6
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 4.1e-162 575.5 487 60.0
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 2.3e-160 569.7 488 61.9
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 8.1e-158 561.2 499 58.5
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.9e-147 526.2 398 68.6
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.3e-144 516.5 381 68.0
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 1.5e-143 513.8 480 56.5
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.6e-137 493.8 518 51.5
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 4.6e-129 465.7 517 49.1
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 6.7e-128 461.8 484 49.8
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 3.3e-127 459.5 484 49.4
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 3.7e-126 456.1 490 49.4
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 6.2e-126 455.3 406 59.4
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 4.2e-122 442.6 473 48.2
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 3.1e-117 426.4 330 66.7
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 8.5e-115 418.3 384 60.2
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 8.2e-110 401.7 293 69.3
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 1.8e-109 400.6 445 48.5
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.5e-82 311.2 669 34.8
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 5.0e-75 286.2 182 77.5
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 5.6e-74 282.7 514 36.6
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 3.1e-56 223.8 158 67.7
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 4.3e-50 203.4 227 44.9
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 2.5e-42 177.6 127 76.4
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 2.5e-34 151.0 95 74.7
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 3.3e-34 150.6 77 96.1
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 9.3e-21 105.9 68 75.0
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.5e-15 88.6 100 44.0
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-14 85.5 125 37.6
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.3e-14 85.5 71 60.6
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 2.2e-14 84.7 62 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 4.1e-08 63.9 271 22.9
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 4.5e-07 60.5 286 22.4
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 5.9e-07 60.1 60 46.7
CAN.G774.53 Capsicum annuum HOM05D005554 ORTHO05D007823 7.6e-07 59.7 304 24.0
Prupe.5G101100 Prunus persica HOM05D005554 ORTHO05D007823 1.0e-06 59.3 268 23.9
ATR0680G162 Amborella trichopoda HOM05D005554 ORTHO05D007823 1.3e-06 58.9 296 23.3
MD06G1085100 Malus domestica HOM05D005554 ORTHO05D007823 1.7e-06 58.5 266 24.8
MBI18_g45367_MAGBIO Magnolia biondii HOM05D005554 ORTHO05D007823 2.2e-06 58.2 303 23.1
Oeu064085.1 Olea europaea HOM05D005554 ORTHO05D007823 2.9e-06 57.8 300 23.3
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 2.9e-06 57.8 263 24.0
Cpa.g.sc74.56 Carica papaya HOM05D005554 ORTHO05D007823 5.0e-06 57.0 264 23.9
Dinv38934 Davidia involucrata HOM05D005554 ORTHO05D007823 5.0e-06 57.0 306 22.9
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 5.0e-06 57.0 286 21.0
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla HOM05D005554 ORTHO05D007823 6.5e-06 56.6 265 23.8
PGSC0003DMG402012338 Solanum tuberosum HOM05D005554 ORTHO05D007823 6.5e-06 56.6 296 24.0
Atru.chr9.2175 Acer truncatum HOM05D005554 ORTHO05D007823 8.5e-06 56.2 293 21.8
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 8.5e-06 56.2 74 47.3
Solyc08g081170.4 Solanum lycopersicum HOM05D005554 ORTHO05D007823 8.5e-06 56.2 301 23.3


User provided reference genes

Program Settings