Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 4.1e-45 184.5 103 100.0
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 6.2e-33 144.1 100 80.0
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 1.4e-32 142.9 100 81.0
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 1.7e-30 136.0 131 64.9
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 4.9e-30 134.4 131 64.1
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 6.0e-28 127.5 100 68.0
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 1.3e-27 126.3 101 66.3
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 1.7e-27 125.9 100 69.0
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 3.0e-27 125.2 100 66.0
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 8.6e-27 123.6 101 65.3
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 3.3e-26 121.7 100 67.0
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 9.5e-26 120.2 105 66.7
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 1.6e-25 119.4 101 66.3
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 2.1e-25 119.0 100 64.0
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 2.1e-25 119.0 110 61.8
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 6.2e-25 117.5 90 72.2
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 6.2e-25 117.5 93 64.5
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 6.2e-25 117.5 99 68.7
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 8.1e-25 117.1 100 63.0
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 1.4e-24 116.3 96 68.8
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 1.4e-24 116.3 91 70.3
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 1.8e-24 115.9 90 71.1
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 4.0e-24 114.8 96 67.7
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 8.9e-24 113.6 100 62.0
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 8.9e-24 113.6 91 68.1
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 1.5e-23 112.8 90 70.0
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 1.5e-23 112.8 104 61.5
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 1.5e-23 112.8 104 61.5
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 2.6e-23 112.1 93 64.5
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 1.3e-22 109.8 104 61.5
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 6.4e-22 107.5 115 53.9
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 8.4e-22 107.1 99 62.6
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 1.1e-21 106.7 100 62.0
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 1.9e-21 105.9 100 63.0
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 2.4e-21 105.5 96 63.5
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 4.2e-21 104.8 96 61.5
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 7.1e-21 104.0 95 58.9
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 2.1e-20 102.4 104 57.7
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 6.0e-20 100.9 92 62.0
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 7.8e-20 100.5 102 53.9
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 7.8e-20 100.5 102 53.9
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 1.0e-19 100.1 99 58.6
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 1.7e-19 99.4 100 55.0
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.7e-19 99.4 103 58.3
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 2.3e-19 99.0 96 57.3
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 5.1e-19 97.8 95 61.1
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 5.1e-19 97.8 100 58.0
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 6.6e-19 97.4 94 59.6
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 8.7e-19 97.1 102 55.9
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 1.1e-18 96.7 100 55.0
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 1.5e-18 96.3 97 53.6
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 3.3e-18 95.1 104 51.9
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 3.3e-18 95.1 99 57.6
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 2.8e-17 92.0 102 52.0
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 3.6e-17 91.7 85 62.4
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 6.2e-17 90.9 143 42.7
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 8.1e-17 90.5 107 54.2
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 1.4e-16 89.7 107 54.2
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 2.4e-16 89.0 107 54.2
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 3.1e-16 88.6 97 54.6
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 4.0e-16 88.2 89 52.8
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 5.3e-16 87.8 100 56.0
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 5.3e-16 87.8 100 53.0
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 9.0e-16 87.0 100 53.0
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 2.6e-15 85.5 109 49.5
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 9.9e-15 83.6 100 49.0
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 1.3e-14 83.2 92 51.1
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 1.7e-14 82.8 101 47.5
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 2.9e-14 82.0 96 47.9
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 3.8e-14 81.6 98 46.9
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 3.8e-14 81.6 100 52.0
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 4.9e-14 81.3 92 50.0
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 4.9e-14 81.3 92 50.0
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 6.4e-14 80.9 77 59.7
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 1.1e-13 80.1 92 48.9
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 1.1e-13 80.1 92 48.9
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 3.2e-13 78.6 92 52.2
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 3.2e-13 78.6 88 53.4
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 5.4e-13 77.8 91 49.5
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 1.2e-12 76.6 90 50.0
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 1.2e-12 76.6 92 48.9
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 1.6e-12 76.3 153 38.6
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 2.1e-12 75.9 63 63.5
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 2.7e-12 75.5 91 47.3
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 3.0e-11 72.0 102 45.1
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 3.0e-11 72.0 92 45.7
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 3.9e-11 71.6 100 44.0
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 6.6e-11 70.9 92 46.7
MBI13_g30326_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 1.1e-10 70.1 160 35.6
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 2.8e-09 65.5 92 44.6
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 4.8e-09 64.7 99 42.4
Nitab4.5_0001618g0280 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.4e-08 63.2 83 50.6
AUR62024507 Chenopodium quinoa HOM05D007492 ORTHO05D009510 2.6e-07 58.9 118 38.1
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 3.4e-07 58.5 100 38.0
Zm00001eb380160 Zea mays HOM05D007492 ORTHO05D009510 1.7e-06 56.2 84 41.7
Zm00001eb195500 Zea mays HOM05D007492 ORTHO05D009510 2.9e-06 55.5 85 40.0


User provided reference genes

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