Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 2.8e-177 625.2 314 100.0
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.1e-144 516.9 357 77.0
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 7.2e-133 477.6 317 76.7
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 5.7e-130 468.0 315 74.9
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 2.2e-126 456.1 318 72.6
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.6e-116 423.3 307 69.1
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 6.8e-115 417.9 309 68.0
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 7.5e-114 414.5 313 64.9
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.7e-113 412.1 313 64.5
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 6.3e-113 411.4 284 71.8
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.1e-112 410.6 307 64.5
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 3.1e-112 409.1 319 62.4
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 2.7e-111 406.0 311 63.3
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.7e-111 406.0 319 61.8
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.7e-111 404.4 309 64.7
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.0e-110 404.1 311 65.3
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.2e-109 398.7 309 63.8
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 1.6e-108 396.7 311 62.7
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.0e-107 394.0 304 62.5
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 1.0e-107 394.0 299 63.5
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.4e-107 393.7 305 61.6
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.8e-107 393.3 303 64.7
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 5.2e-107 391.7 310 61.0
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 3.4e-106 389.0 304 61.2
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 7.5e-106 387.9 318 60.7
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 9.8e-106 387.5 305 63.0
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 1.3e-105 387.1 302 61.6
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 3.7e-105 385.6 305 63.6
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 2.4e-104 382.9 303 60.7
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 5.4e-104 381.7 306 60.8
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 9.1e-104 380.9 319 58.3
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.6e-103 380.2 301 61.1
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 2.0e-103 379.8 291 63.2
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 2.7e-103 379.4 305 60.7
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 3.5e-103 379.0 302 59.9
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 5.9e-103 378.3 304 60.2
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.0e-102 377.5 405 50.4
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 1.3e-102 377.1 304 60.2
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 1.7e-102 376.7 303 60.1
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 3.8e-102 375.6 306 60.8
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 3.8e-102 375.6 304 59.2
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 5.0e-102 375.2 295 61.7
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 6.6e-102 374.8 303 59.4
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 8.6e-102 374.4 279 64.2
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 8.6e-102 374.4 282 63.8
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-101 374.0 295 62.0
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.1e-101 374.0 306 61.4
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.9e-101 373.2 311 59.5
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 2.1e-100 369.8 305 59.3
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 3.6e-100 369.0 313 58.5
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 4.7e-100 368.6 286 61.5
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 6.1e-100 368.2 306 61.8
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 6.1e-100 368.2 311 58.8
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 3.0e-99 365.9 313 59.7
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.5e-98 363.6 308 56.8
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 4.4e-98 362.1 305 55.7
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 5.7e-98 361.7 305 56.1
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 7.5e-98 361.3 301 58.5
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.7e-97 360.1 272 65.1
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 4.9e-97 358.6 316 57.0
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 8.3e-97 357.8 309 53.1
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.0e-95 353.2 293 57.3
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 9.5e-93 344.4 298 57.4
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 2.8e-92 342.8 263 62.7
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 3.6e-92 342.4 317 54.6
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 3.6e-92 342.4 308 56.2
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.4e-91 340.5 299 55.5
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.4e-91 340.5 442 44.1
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.4e-88 330.5 303 53.8
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 3.0e-86 322.8 301 51.8
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 5.0e-86 322.0 226 66.4
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 6.6e-86 321.6 298 51.7
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.5e-85 320.5 309 52.8
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 3.3e-85 319.3 265 56.2
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 5.6e-85 318.5 290 53.1
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.1e-83 314.3 291 56.4
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 4.0e-83 312.4 231 65.4
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 9.8e-82 307.8 343 51.0
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 2.9e-81 306.2 306 51.6
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 4.9e-81 305.4 302 49.7
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 9.2e-80 301.2 261 55.2
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 2.5e-77 293.1 225 64.0
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.8e-76 289.7 220 63.6
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.8e-76 289.7 292 50.7
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 2.2e-73 280.0 237 56.5
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 2.9e-73 279.6 295 46.1
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.6e-71 273.9 220 59.1
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 1.4e-67 260.8 207 59.9
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 2.1e-63 246.9 215 58.1
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.9e-62 242.7 207 58.5
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 6.6e-62 241.9 298 45.6
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.9e-61 240.4 286 40.9
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 7.9e-55 218.4 313 36.4
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 4.3e-53 212.6 150 65.3
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.0e-50 203.8 174 56.3
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 7.6e-50 201.8 195 52.8
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 2.4e-48 196.8 285 41.4
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 7.1e-48 195.3 195 51.3
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 9.3e-48 194.9 420 34.0
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 2.7e-47 193.4 306 37.6
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 3.7e-44 183.0 142 59.2
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 1.8e-43 180.6 144 59.0
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 1.3e-41 174.5 181 44.2
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.5e-37 161.0 311 33.4
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.5e-37 160.2 103 68.9
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 4.3e-37 159.5 125 60.0
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.0e-33 148.3 219 44.3
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.4e-32 144.4 142 54.9
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 1.8e-27 127.5 84 66.7
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.0e-25 121.7 96 55.2
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 7.2e-24 115.5 71 71.8
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 3.9e-22 109.8 86 58.1
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 4.3e-21 106.3 252 27.8
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 5.7e-21 105.9 337 27.0
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.8e-20 103.6 93 53.8
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.8e-19 100.9 76 59.2
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 6.5e-17 92.4 79 65.8
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 5.3e-11 72.8 319 26.0
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 6.5e-09 65.9 38 73.7
Ca_12392_v3 Cicer arietinum L. HOM05D000112 ORTHO05D023238 4.7e-07 59.7 49 61.2


User provided reference genes

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