Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016502 Carpinus fangiana HOM05D006485 ORTHO05D006108 7.1e-80 301.6 317 100.0
Haze_19505 Corylus avellana HOM05D006485 ORTHO05D006108 5.9e-34 149.1 318 64.8
Cfa016504 Carpinus fangiana HOM05D006485 ORTHO05D006108 3.2e-24 116.7 481 53.2
Cfa020727 Carpinus fangiana HOM05D006485 ORTHO05D006108 1.0e-17 95.1 87 74.7
QL07p041110 Quercus lobata HOM05D006485 ORTHO05D006108 5.9e-10 69.3 113 38.9
COL.COLO4_22277 Corchorus olitorius HOM05D006485 ORTHO05D006108 3.0e-09 67.0 54 51.9
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 6.6e-09 65.9 62 53.2
TWI53G1251 Tripterygium wilfordii HOM05D006485 ORTHO05D006108 6.6e-09 65.9 160 40.0
CANSAT80G1413 Cannabis sativa HOM05D006485 ORTHO05D006108 1.1e-08 65.1 59 54.2
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.5e-08 64.7 175 30.3
Lalb_Chr06g0172031 Lupinus albus HOM05D013674 ORTHO05D006108 3.3e-08 63.5 62 53.2
AL5G33870 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 7.3e-08 62.4 69 50.7
Glyma.10G064400 Glycine max HOM05D013674 ORTHO05D006108 1.6e-07 61.2 64 50.0
Psat6g077640 Pisum sativum HOM05D013674 ORTHO05D006108 2.1e-07 60.8 129 47.3
Aqoxy1G01006 Aquilegia oxysepala HOM05D006485 ORTHO05D006108 2.8e-07 60.5 68 47.1
MELO3C009418.2 Cucumis melo HOM05D006485 ORTHO05D006108 2.8e-07 60.5 58 53.4
CsaV3_3G036640 Cucumis sativus L. HOM05D006485 ORTHO05D006108 2.8e-07 60.5 62 54.8
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 4.7e-07 59.7 51 56.9
SalBow5G2944 Salvia bowleyana HOM05D006485 ORTHO05D006108 4.7e-07 59.7 60 50.0
TAR623G0376 Trochodendron aralioides HOM05D006485 ORTHO05D006108 4.7e-07 59.7 55 52.7
Gohir.A04G067600 Gossypium hirsutum HOM05D006485 ORTHO05D006108 6.2e-07 59.3 50 60.0
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 6.2e-07 59.3 73 45.2
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 1.4e-06 58.2 90 50.0
Migut.L01738 Erythranthe guttata HOM05D013674 ORTHO05D006108 1.4e-06 58.2 49 59.2
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 1.8e-06 57.8 53 52.8
Phvul.007G225200 Phaseolus vulgaris HOM05D013674 ORTHO05D006108 1.8e-06 57.8 54 55.6
VMungo0720G1050 Vigna mungo HOM05D013674 ORTHO05D004088 1.8e-06 57.8 54 51.9
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 2.3e-06 57.4 65 52.3
Gohir.D04G106200 Gossypium hirsutum HOM05D006485 ORTHO05D006108 2.3e-06 57.4 50 58.0
Gorai.009G410100 Gossypium raimondii HOM05D006485 ORTHO05D006108 2.3e-06 57.4 50 58.0
Eucgr.A01582 Eucalyptus grandis HOM05D006485 ORTHO05D006108 5.2e-06 56.2 45 66.7
BcaB02g08540 Brassica carinata HOM05D006485 ORTHO05D006108 6.8e-06 55.8 45 53.3
A04p06430 Brassica napus HOM05D006485 ORTHO05D006108 6.8e-06 55.8 48 56.2
BraA04t16347Z Brassica rapa HOM05D006485 ORTHO05D006108 6.8e-06 55.8 48 56.2
Medtr1g061730 Medicago truncatula HOM05D013674 ORTHO05D006108 6.8e-06 55.8 134 47.0
C04p39920 Brassica napus HOM05D006485 ORTHO05D006108 8.9e-06 55.5 155 42.6


User provided reference genes

Program Settings