Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 1.7e-47 192.2 88 100.0
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 3.4e-08 61.6 31 87.1
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 5.9e-08 60.8 28 96.4
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 1.3e-07 59.7 28 92.9
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 1.3e-07 59.7 28 92.9
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.7e-07 59.3 28 92.9
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 2.2e-07 58.9 28 92.9
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 2.2e-07 58.9 28 92.9
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 2.2e-07 58.9 27 96.3
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 2.2e-07 58.9 28 92.9
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 2.9e-07 58.5 28 89.3
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 3.8e-07 58.2 28 89.3
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 3.8e-07 58.2 28 89.3
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 3.8e-07 58.2 28 89.3
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.8e-07 58.2 28 85.7
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.8e-07 58.2 28 85.7
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 3.8e-07 58.2 28 85.7
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 85.7
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 85.7
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 5.0e-07 57.8 28 89.3
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 6.5e-07 57.4 28 89.3
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 6.5e-07 57.4 27 92.6
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 6.5e-07 57.4 27 92.6
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 6.5e-07 57.4 30 80.0
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 85.7
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 8.5e-07 57.0 47 57.4
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 89.3
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 92.9
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 85.7
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 85.7
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 85.7
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 8.5e-07 57.0 28 85.7
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 8.5e-07 57.0 28 85.7
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.1e-06 56.6 28 85.7
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.1e-06 56.6 28 85.7
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.1e-06 56.6 28 85.7
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 1.1e-06 56.6 42 64.3
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 1.4e-06 56.2 27 88.9
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 1.4e-06 56.2 27 88.9
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 1.4e-06 56.2 27 88.9
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 1.4e-06 56.2 27 88.9
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 1.9e-06 55.8 27 88.9
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 2.5e-06 55.5 28 78.6
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 5.5e-06 54.3 28 82.1
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 5.5e-06 54.3 28 75.0
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 5.5e-06 54.3 28 75.0


User provided reference genes

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