Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.2e-115 419.9 218 100.0
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 1.0e-106 390.2 233 88.4
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 7.8e-94 347.4 220 83.6
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 2.1e-91 339.3 219 80.8
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 5.2e-90 334.7 223 78.5
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 3.4e-89 332.0 226 77.4
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 3.4e-89 332.0 223 77.1
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 4.9e-88 328.2 226 75.2
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 1.1e-87 327.0 223 75.3
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 5.1e-85 318.2 223 73.5
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 6.6e-85 317.8 223 75.3
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 8.6e-85 317.4 224 76.8
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.1e-84 317.0 232 71.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 1.9e-84 316.2 221 75.1
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 4.3e-84 315.1 223 74.9
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.6e-83 313.2 225 72.9
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 3.6e-83 312.0 214 79.0
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.7e-83 311.6 220 74.1
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.8e-82 309.7 225 73.3
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 5.2e-82 308.1 230 70.0
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.2e-81 307.0 220 72.7
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 5.8e-81 304.7 229 70.7
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 5.8e-81 304.7 237 69.6
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 5.8e-81 304.7 223 71.7
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 7.6e-81 304.3 216 75.5
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 9.9e-81 303.9 222 72.1
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.2e-80 302.8 222 71.6
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 2.9e-80 302.4 194 77.3
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.9e-80 302.4 222 71.6
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.9e-80 302.4 222 71.6
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.9e-80 302.4 191 82.2
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 3.8e-80 302.0 225 71.6
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 8.4e-80 300.8 237 69.6
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 8.4e-80 300.8 225 72.4
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 1.1e-79 300.4 221 71.5
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.1e-79 300.4 220 70.0
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 1.1e-79 300.4 233 70.4
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.4e-79 299.3 222 71.2
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 2.4e-79 299.3 213 71.8
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 9.2e-79 297.4 220 72.3
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.2e-78 297.0 206 72.3
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.2e-78 297.0 220 73.2
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 1.3e-77 293.5 230 68.7
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.7e-77 293.1 206 74.8
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.7e-77 293.1 208 71.6
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 3.0e-77 292.4 208 71.6
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.6e-77 291.2 208 71.2
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 6.6e-77 291.2 225 69.8
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 4.3e-76 288.5 231 66.2
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 5.6e-76 288.1 223 69.5
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 9.6e-76 287.3 210 71.0
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 1.6e-75 286.6 197 73.1
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 3.6e-75 285.4 218 68.8
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 8.1e-75 284.3 227 67.4
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 8.1e-75 284.3 180 79.4
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 8.1e-75 284.3 220 69.1
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.4e-74 282.7 213 68.5
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.4e-74 282.7 213 68.5
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 8.9e-74 280.8 200 71.5
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 2.6e-73 279.3 217 71.0
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 8.4e-72 274.2 222 66.7
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.4e-71 271.6 204 69.6
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 7.1e-71 271.2 214 66.4
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 7.1e-71 271.2 172 80.2
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.6e-70 270.0 219 64.8
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 2.7e-70 269.2 219 65.3
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 7.8e-70 267.7 185 70.3
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 7.8e-70 267.7 218 65.1
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 8.7e-69 264.2 214 65.4
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.1e-68 263.8 210 63.8
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.5e-68 263.5 210 62.9
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.9e-68 263.1 210 63.3
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.9e-68 263.1 171 77.2
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.5e-68 262.7 220 63.6
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 9.6e-68 260.8 195 72.8
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.3e-67 260.4 210 64.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.8e-67 259.2 212 64.6
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 6.2e-67 258.1 214 63.1
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.4e-66 256.9 210 65.2
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.2e-65 253.8 164 76.8
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 1.5e-65 253.4 220 60.5
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 1.5e-65 253.4 220 60.0
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 4.5e-65 251.9 224 60.7
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 7.6e-65 251.1 220 60.5
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 9.9e-65 250.8 208 61.5
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 1.7e-64 250.0 218 60.6
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 1.4e-63 246.9 198 66.2
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 3.2e-63 245.7 212 59.4
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 3.2e-63 245.7 212 59.4
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 3.2e-63 245.7 212 59.4
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 7.1e-63 244.6 205 60.5
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 9.3e-63 244.2 218 58.7
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 9.3e-63 244.2 212 58.5
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 9.3e-63 244.2 212 58.5
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.2e-62 243.8 218 58.3
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.2e-62 243.8 180 70.0
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 2.7e-62 242.7 223 59.2
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 6.0e-62 241.5 224 61.6
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.0e-61 240.7 180 69.4
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 6.7e-61 238.0 189 66.1
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.9e-60 236.5 184 67.9
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.9e-60 236.5 184 67.9
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.5e-60 236.1 225 59.6
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.5e-60 236.1 225 59.6
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.6e-59 233.4 217 59.4
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.6e-59 233.4 217 55.8
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.1e-59 233.0 157 73.9
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 1.1e-58 230.7 178 68.0
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.0e-57 226.5 221 59.3
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 9.9e-57 224.2 157 70.1
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 2.2e-56 223.0 157 73.9
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 2.2e-56 223.0 157 72.6
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 8.4e-56 221.1 214 56.1
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 2.4e-55 219.5 184 66.3
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 3.2e-55 219.2 155 68.4
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 7.1e-55 218.0 190 57.4
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.2e-54 217.2 157 69.4
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 2.7e-54 216.1 210 60.5
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 1.0e-53 214.2 157 71.3
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.8e-53 213.4 137 79.6
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 1.9e-52 209.9 147 72.1
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 4.3e-52 208.8 185 58.4
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 9.6e-52 207.6 172 64.0
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 2.1e-51 206.5 174 61.5
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 6.2e-51 204.9 149 68.5
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 1.1e-50 204.1 201 57.2
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.8e-50 203.4 216 51.9
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 2.6e-49 199.5 155 63.2
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 3.8e-48 195.7 196 53.6
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 1.9e-47 193.4 136 70.6
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 5.5e-47 191.8 144 72.9
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.2e-46 190.7 118 82.2
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.2e-46 190.7 183 54.6
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 3.9e-45 185.7 191 50.3
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.1e-45 185.3 125 76.0
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 1.5e-44 183.7 177 58.8
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 1.5e-44 183.7 177 58.8
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 3.7e-43 179.1 137 65.7
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 1.2e-38 164.1 226 45.6
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.2e-38 164.1 106 79.2
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.6e-38 162.5 106 78.3
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.3e-37 160.6 223 44.8
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 8.7e-37 157.9 216 45.4
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 1.5e-36 157.1 157 52.2
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 1.8e-34 150.2 108 71.3
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 5.3e-26 122.1 87 65.5
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.3e-24 117.5 185 42.7
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 7.4e-20 101.7 204 33.8
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 4.7e-14 82.4 80 57.5
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 8.8e-13 78.2 91 47.3
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 8.8e-13 78.2 91 47.3


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