Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 1.1e-93 346.7 176 100.0
CiPaw.08G129800 Carya illinoinensis HOM05D015404 ORTHO05D011570 9.8e-47 190.7 171 60.8
Haze_16765 Corylus avellana HOM05D015404 ORTHO05D011570 9.8e-47 190.7 104 90.4
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 1.4e-45 186.8 168 58.9
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 2.7e-44 182.6 159 57.9
RcHm_v2.0_Chr1g0379631 Rosa chinensis HOM05D015404 ORTHO05D011570 5.8e-23 111.7 115 48.7
Sed0001122 Sechium edule HOM05D010021 ORTHO05D011570 1.4e-16 90.5 178 31.5
ClCG00G003470 Citrullus lanatus HOM05D010021 ORTHO05D011570 1.5e-15 87.0 176 31.2
ClCG01G000740 Citrullus lanatus HOM05D010021 ORTHO05D011570 1.5e-15 87.0 176 31.2
Sed0013435 Sechium edule HOM05D010021 ORTHO05D011570 2.6e-15 86.3 170 31.8
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 4.5e-15 85.5 170 28.8
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 7.6e-15 84.7 169 30.8
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 4.9e-14 82.0 186 30.1
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 4.9e-14 82.0 186 30.1
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 4.9e-14 82.0 105 41.9
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.9e-13 80.1 170 27.1
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 7.1e-13 78.2 176 30.1
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 2.1e-12 76.6 156 30.1
Sed0010999 Sechium edule HOM05D010021 ORTHO05D011570 7.9e-12 74.7 167 31.1
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 3.0e-11 72.8 170 28.2
CDE04G0525 Ceratophyllum demersum HOM05D015404 ORTHO05D010031 6.7e-11 71.6 168 29.8
CsaV3_5G000880 Cucumis sativus L. HOM05D010021 ORTHO05D011570 3.3e-10 69.3 175 30.9
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 4.3e-10 68.9 176 28.4
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 4.3e-10 68.9 163 28.2
ClCG01G000770 Citrullus lanatus HOM05D010021 ORTHO05D011570 9.6e-10 67.8 188 29.3
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 1.6e-09 67.0 168 27.4
MELO3C005853.2 Cucumis melo HOM05D010021 ORTHO05D011570 1.6e-09 67.0 171 31.6
CsaV3_5G028200 Cucumis sativus L. HOM05D010021 ORTHO05D011570 2.1e-09 66.6 176 28.4
Sopen08g021610 Solanum pennellii HOM05D031006 ORTHO05D030675 2.1e-09 66.6 134 30.6
Gohir.D12G254800 Gossypium hirsutum HOM05D015404 ORTHO05D011570 2.8e-09 66.2 109 31.2
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 3.7e-09 65.9 182 29.1
Sed0027503 Sechium edule HOM05D010021 ORTHO05D011570 3.7e-09 65.9 176 30.1
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 4.8e-09 65.5 176 27.3
Sed0026961 Sechium edule HOM05D010021 ORTHO05D011570 8.1e-09 64.7 169 29.0
Sed0014190 Sechium edule HOM05D010021 ORTHO05D011570 1.1e-08 64.3 156 26.3
Sed0006704 Sechium edule HOM05D010021 ORTHO05D011570 1.4e-08 63.9 169 29.0
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 4.0e-08 62.4 158 32.3
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 9.0e-08 61.2 170 27.6
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 9.0e-08 61.2 170 27.6
MD08G1133000 Malus domestica HOM05D017842 ORTHO05D020741 2.0e-07 60.1 166 26.5
MD15G1111500 Malus domestica HOM05D017842 ORTHO05D020741 2.6e-07 59.7 168 28.0
ClCG01G000750 Citrullus lanatus HOM05D010021 ORTHO05D011570 5.8e-07 58.5 114 31.6
CsaV3_3G024990 Cucumis sativus L. HOM05D010021 ORTHO05D011570 1.7e-06 57.0 181 26.5
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.2e-06 56.6 96 29.2
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 6.4e-06 55.1 166 23.5
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 6.4e-06 55.1 172 25.0
Sed0010589 Sechium edule HOM05D010021 ORTHO05D011570 6.4e-06 55.1 103 33.0


User provided reference genes

Program Settings