Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 7.1e-40 166.8 82 100.0
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.9e-13 79.0 82 59.8
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.5e-13 78.6 82 58.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.1e-12 75.5 83 60.2
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.8e-12 75.1 82 54.9
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.8e-11 72.4 88 51.1
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 2.4e-11 72.0 89 55.1
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 4.0e-11 71.2 79 54.4
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 5.3e-11 70.9 79 55.7
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 5.3e-11 70.9 82 56.1
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 5.3e-11 70.9 82 53.7
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 6.9e-11 70.5 82 53.7
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 6.9e-11 70.5 82 53.7
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 6.9e-11 70.5 83 53.0
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.2e-10 69.7 83 53.0
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 3.4e-10 68.2 82 54.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 5.8e-10 67.4 82 51.2
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 5.8e-10 67.4 82 52.4
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 5.8e-10 67.4 82 52.4
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.0e-09 66.6 79 51.9
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 1.3e-09 66.2 79 55.7
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 2.2e-09 65.5 79 50.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.2e-09 65.5 88 48.9
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.2e-09 65.5 88 48.9
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 2.2e-09 65.5 79 54.4
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 2.9e-09 65.1 49 71.4
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.8e-09 64.7 79 50.6
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.8e-09 64.7 79 50.6
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 3.8e-09 64.7 81 49.4
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.8e-09 64.7 88 47.7
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 3.8e-09 64.7 81 49.4
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 6.5e-09 63.9 81 51.9
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.1e-08 63.2 82 50.0
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.1e-08 63.2 79 51.9
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.1e-08 63.2 92 48.9
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.1e-08 63.2 79 50.6
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.1e-08 63.2 75 50.7
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.1e-08 63.2 79 50.6
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 1.1e-08 63.2 79 50.6
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 1.4e-08 62.8 79 49.4
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.4e-08 62.8 91 48.4
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.4e-08 62.8 76 51.3
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 1.4e-08 62.8 79 51.9
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.4e-08 62.8 79 50.6
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.9e-08 62.4 79 49.4
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-08 62.4 79 49.4
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-08 62.4 79 49.4
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-08 62.4 79 49.4
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.9e-08 62.4 79 51.9
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 3.2e-08 61.6 79 50.6
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 4.2e-08 61.2 49 67.3
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 5.5e-08 60.8 49 65.3
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 9.3e-08 60.1 86 48.8
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.2e-07 59.7 79 48.1
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.6e-07 59.3 63 60.3
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.6e-07 59.3 63 60.3
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.6e-07 59.3 50 64.0
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.6e-07 59.3 77 49.4
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 3.5e-07 58.2 89 44.9
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 3.5e-07 58.2 74 52.7
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.1e-07 57.4 49 63.3
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.1e-07 57.4 49 63.3
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 6.1e-07 57.4 88 45.5
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 6.1e-07 57.4 79 45.6
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.0e-06 56.6 82 46.3
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 1.0e-06 56.6 82 48.8
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.3e-06 56.2 79 46.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.3e-06 56.2 77 49.4
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.3e-06 56.2 77 49.4
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.3e-06 56.2 49 63.3
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.3e-06 56.2 77 46.8
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 1.3e-06 56.2 89 47.2
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 1.8e-06 55.8 49 61.2
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.8e-06 55.8 82 43.9
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 2.3e-06 55.5 97 40.2
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.3e-06 55.5 82 46.3
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.0e-06 55.1 77 48.1
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 3.0e-06 55.1 49 63.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.9e-06 54.7 77 46.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 5.1e-06 54.3 77 46.8
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 5.1e-06 54.3 82 46.3
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 8.7e-06 53.5 52 57.7
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 8.7e-06 53.5 49 57.1


User provided reference genes

Program Settings