Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 0.0e+00 1370.5 697 100.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 0.0e+00 1111.7 766 78.6
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 3.5e-220 768.8 712 61.4
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.2e-209 733.8 710 60.0
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 1.0e-208 730.7 718 57.4
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 2.3e-208 729.6 634 64.5
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 4.0e-208 728.8 712 60.3
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.8e-205 719.9 708 59.2
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 3.1e-205 719.2 707 57.1
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 4.5e-204 715.3 714 57.1
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 5.9e-204 714.9 716 58.0
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.3e-202 708.8 706 56.8
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 6.1e-201 704.9 712 58.7
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 5.2e-200 701.8 714 57.0
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 2.6e-199 699.5 729 56.4
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.2e-197 692.6 707 55.9
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.1e-197 692.2 709 55.3
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 3.3e-194 682.6 711 56.5
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.8e-192 676.8 718 54.9
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-190 669.8 723 54.4
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.9e-190 668.7 704 54.8
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 5.4e-189 665.2 642 58.6
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 5.4e-189 665.2 716 55.4
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 9.2e-189 664.5 712 57.9
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.6e-188 663.7 715 55.4
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 3.5e-188 662.5 704 55.7
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.5e-188 662.5 711 57.5
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 7.8e-188 661.4 716 55.0
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 8.1e-185 651.4 718 53.1
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.4e-184 650.6 710 53.4
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-184 650.2 708 53.2
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.6e-183 646.4 709 53.9
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 2.2e-182 643.3 719 52.4
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.1e-181 641.0 718 52.2
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.1e-181 641.0 708 53.8
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 4.1e-181 639.0 709 54.4
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.2e-180 637.5 701 53.6
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 4.6e-180 635.6 731 51.0
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.5e-178 630.6 710 54.1
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.6e-177 627.1 717 53.6
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 3.8e-174 615.9 715 51.7
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-173 614.4 708 54.7
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.4e-173 614.0 720 54.0
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 4.1e-173 612.5 723 51.6
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.1e-173 611.7 708 54.5
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.1e-172 610.1 702 53.4
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.7e-171 607.1 696 53.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 5.1e-171 605.5 630 56.5
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 5.6e-170 602.1 711 51.5
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 9.6e-170 601.3 710 50.3
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 2.1e-169 600.1 728 50.1
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.7e-169 599.0 711 53.6
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 4.7e-169 599.0 725 49.8
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 9.9e-167 591.3 708 51.1
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 4.2e-165 585.9 711 49.5
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 7.1e-165 585.1 715 50.8
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.7e-164 583.2 827 46.2
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 3.0e-163 579.7 622 54.2
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.5e-162 577.4 716 48.5
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.7e-158 563.9 721 49.9
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.1e-157 561.2 731 48.2
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.6e-156 557.4 716 49.0
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.1e-156 557.0 681 49.9
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 6.0e-156 555.4 705 48.1
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 8.7e-155 551.6 716 47.8
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.5e-154 550.1 720 50.4
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 4.8e-153 545.8 732 47.7
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 1.5e-151 540.8 716 47.6
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 9.9e-151 538.1 725 46.8
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 4.9e-150 535.8 524 57.4
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.1e-149 534.6 814 43.0
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 9.3e-149 531.6 728 47.3
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.9e-147 526.2 566 57.1
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 7.4e-146 521.9 722 45.4
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.5e-143 514.2 712 46.5
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 4.5e-143 512.7 711 47.4
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.4e-141 507.7 750 43.7
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.2e-141 506.5 712 44.9
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.5e-141 505.8 781 45.1
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.2e-140 504.6 714 45.2
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.6e-140 504.2 715 45.3
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.3e-139 501.1 717 47.1
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.3e-139 501.1 715 45.2
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 2.3e-139 500.4 734 44.7
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.3e-137 492.3 717 45.9
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.6e-135 486.9 735 43.8
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.9e-135 485.7 720 46.9
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.0e-134 485.0 712 44.7
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.5e-134 481.9 707 44.6
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.1e-133 481.5 714 46.1
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 7.2e-133 478.8 778 42.3
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-132 478.0 625 45.8
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.3e-131 473.8 704 43.5
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 4.3e-130 469.5 710 45.6
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.6e-129 467.6 582 48.6
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.5e-127 459.5 707 43.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 5.0e-126 456.1 709 43.7
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 5.5e-125 452.6 663 45.7
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 2.1e-124 450.7 793 41.1
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 6.1e-124 449.1 711 43.5
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.1e-122 444.9 664 43.2
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 9.7e-122 441.8 709 42.3
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.7e-121 441.0 638 45.1
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 8.2e-121 438.7 739 42.9
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 3.1e-120 436.8 702 43.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.3e-118 431.4 641 45.2
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 3.0e-115 420.2 698 42.1
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-113 414.8 705 43.5
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.2e-113 414.1 701 42.2
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 2.2e-113 414.1 699 41.9
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 4.8e-113 412.9 701 42.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 6.3e-113 412.5 698 41.1
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 6.3e-113 412.5 783 38.4
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 2.4e-112 410.6 643 42.8
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 4.1e-112 409.8 719 40.8
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 9.1e-112 408.7 726 40.5
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 3.6e-108 396.7 701 39.7
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.0e-106 391.0 693 39.5
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 3.3e-106 390.2 695 41.0
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 5.7e-106 389.4 691 39.8
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 9.7e-106 388.7 698 40.3
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.2e-105 387.5 695 41.2
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.8e-104 384.4 697 39.6
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.4e-104 384.0 704 40.1
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 3.1e-104 383.6 698 40.1
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 3.8e-102 376.7 696 39.1
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 7.2e-101 372.5 689 38.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 7.2e-101 372.5 699 39.2
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.4e-99 368.2 643 41.7
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.7e-97 361.3 910 33.2
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.2e-97 360.9 705 37.9
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.2e-95 355.1 581 44.2
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.2e-95 355.1 714 39.4
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 1.5e-93 348.2 699 37.1
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.7e-92 343.2 298 60.7
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-86 325.1 330 58.5
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 8.6e-86 322.4 857 34.0
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 4.7e-84 316.6 717 35.1
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 9.8e-82 308.9 585 38.8
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.6e-78 296.2 726 33.5
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.5e-77 294.3 343 50.4
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.6e-76 290.4 442 44.6
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.2e-75 286.6 366 45.9
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.5e-74 285.0 500 41.0
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.4e-74 283.9 721 34.7
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 3.4e-74 283.9 575 36.0
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.5e-74 282.7 298 53.7
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.3e-70 271.2 359 46.5
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 5.0e-70 270.0 621 35.7
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.3e-69 267.3 296 52.4
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 6.2e-68 263.1 304 48.7
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.3e-62 244.6 640 34.2
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.2e-60 238.8 288 46.9
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 3.8e-57 227.3 285 46.0
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 9.3e-48 196.1 440 37.7
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.2e-47 195.7 138 68.1
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.9e-45 188.3 460 35.4
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 5.8e-42 176.8 140 67.1
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 9.3e-40 169.5 182 56.0
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.4e-35 155.6 229 42.8
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 8.4e-33 146.4 266 37.2
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 4.2e-32 144.1 326 34.4
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.2e-31 142.5 515 29.9
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.5e-29 135.6 204 42.6
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.3e-27 127.1 97 69.1
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 7.6e-26 123.2 461 32.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.3e-25 122.5 294 30.3
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 3.5e-23 114.4 132 50.0
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 7.9e-23 113.2 353 32.3
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-20 105.9 100 57.0
FAN06G0571 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.9e-15 86.7 105 55.2
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.0e-14 84.7 130 43.8
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 3.7e-12 77.8 163 41.1
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-11 75.9 62 64.5
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-09 69.3 56 58.9
SHI13766 Sapria himalayana HOM05D003626 ORTHO05D004255 3.8e-09 67.8 206 30.1
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.5e-08 65.1 65 49.2
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.2e-08 64.3 156 34.0
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.1e-07 62.0 99 40.4
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.0e-06 59.7 49 69.4
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.8e-06 58.9 111 34.2


User provided reference genes

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