Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016136 Carpinus fangiana HOM05D000010 ORTHO05D000063 8.1e-112 407.1 213 100.0
Haze_00325 Corylus avellana HOM05D000010 ORTHO05D000063 2.0e-33 146.7 81 85.2
Cpa.g.sc3.170 Carica papaya HOM05D000010 ORTHO05D000063 5.9e-22 108.6 209 34.9
QL09p006632 Quercus lobata HOM05D000010 ORTHO05D337432 7.3e-20 101.7 158 41.8
TAR463G0002 Trochodendron aralioides HOM05D000010 ORTHO05D000063 9.5e-20 101.3 210 36.2
QL09p006475 Quercus lobata HOM05D000010 ORTHO05D337439 6.8e-18 95.1 158 40.5
TAR374G0753 Trochodendron aralioides HOM05D000010 ORTHO05D000063 2.0e-17 93.6 204 35.3
QL09p006714 Quercus lobata HOM05D000010 ORTHO05D337135 5.8e-17 92.0 151 43.0
QL09p006617 Quercus lobata HOM05D000010 ORTHO05D337328 4.1e-15 85.9 158 39.2
Cfa016143 Carpinus fangiana HOM05D000010 ORTHO05D000063 7.0e-15 85.1 203 34.5
CiPaw.06G039200 Carya illinoinensis HOM05D000010 ORTHO05D000063 1.0e-13 81.3 187 33.2
Dinv17289 Davidia involucrata HOM05D000617 ORTHO05D000478 1.0e-13 81.3 217 32.3
QL09p006702 Quercus lobata HOM05D000010 ORTHO05D337064 1.7e-13 80.5 152 38.8
QL09p006673 Quercus lobata HOM05D000010 ORTHO05D337891 2.3e-13 80.1 154 38.3
QL09p006487 Quercus lobata HOM05D000010 ORTHO05D000063 3.9e-13 79.3 200 37.5
Duzib068G0334 Durio zibethinus HOM05D000010 ORTHO05D000063 7.3e-12 75.1 204 30.9
Dinv29201 Davidia involucrata HOM05D002523 ORTHO05D002951 2.8e-11 73.2 195 34.4
Gohir.D09G181800 Gossypium hirsutum HOM05D000010 ORTHO05D000063 3.6e-11 72.8 203 32.0
Gorai.006G203800 Gossypium raimondii HOM05D000010 ORTHO05D000063 6.2e-11 72.0 203 31.5
Prupe.2G320600 Prunus persica HOM05D000010 ORTHO05D000063 8.1e-11 71.6 191 34.0
Potri.012G007500 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.1e-10 71.2 202 28.7
Potri.015G004100 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.1e-10 71.2 193 30.6
Cc02_g00700 Coffea canephora HOM05D000010 ORTHO05D000063 1.4e-10 70.9 205 31.2
Dinv19741 Davidia involucrata HOM05D000010 ORTHO05D000063 1.8e-10 70.5 195 33.3
Gohir.A09G186966 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.8e-10 70.5 202 31.2
CANSAT21G2531 Cannabis sativa HOM05D000010 ORTHO05D000063 2.3e-10 70.1 187 34.2
Peaxi162Scf01447g00005 Petunia axillaris HOM05D000010 ORTHO05D000063 2.3e-10 70.1 204 30.4
Nitab4.5_0000115g0100 Nicotiana tabacum HOM05D000617 ORTHO05D000063 3.1e-10 69.7 203 29.6
TWI23G0690 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 5.2e-10 68.9 210 31.4
Nitab4.5_0013228g0020 Nicotiana tabacum HOM05D000010 ORTHO05D000063 2.0e-09 67.0 203 29.6
MD07G1301800 Malus domestica HOM05D000010 ORTHO05D000063 3.4e-09 66.2 191 31.4
CiPaw.05G207100 Carya illinoinensis HOM05D000010 ORTHO05D000063 4.4e-09 65.9 214 29.0
QL09p006602 Quercus lobata HOM05D000010 ORTHO05D337212 7.5e-09 65.1 158 35.4
COL.COLO4_14385 Corchorus olitorius HOM05D000617 ORTHO05D000478 9.8e-09 64.7 184 29.9
Manes.01G044700 Manihot esculenta HOM05D000010 ORTHO05D000063 2.2e-08 63.5 206 32.5
Gohir.D11G016700 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.9e-08 62.4 204 27.0
Gorai.007G017500 Gossypium raimondii HOM05D000010 ORTHO05D000063 4.9e-08 62.4 204 27.0
MD01G1229900 Malus domestica HOM05D000010 ORTHO05D000063 4.9e-08 62.4 193 30.6
Nitab4.5_0004654g0040 Nicotiana tabacum HOM05D000010 ORTHO05D000063 4.9e-08 62.4 190 30.0
TWI60G0454 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 4.9e-08 62.4 204 25.5
Duzib084G1090 Durio zibethinus HOM05D000010 ORTHO05D000063 6.4e-08 62.0 203 28.6
Haze_00311 Corylus avellana HOM05D000010 ORTHO05D164260 8.3e-08 61.6 181 31.5
Peaxi162Scf00815g00121 Petunia axillaris HOM05D000010 ORTHO05D000063 1.4e-07 60.8 210 28.1
CAN.G303.43 Capsicum annuum HOM05D000010 ORTHO05D000063 9.2e-07 58.2 191 30.4
Sopen06g029400 Solanum pennellii HOM05D000010 ORTHO05D000063 2.1e-06 57.0 204 27.9
PGSC0003DMG402027023 Solanum tuberosum HOM05D000010 ORTHO05D000063 2.1e-06 57.0 202 27.2
TAR629G0412 Trochodendron aralioides HOM05D000010 ORTHO05D000063 2.1e-06 57.0 184 27.2
CiPaw.05G206500 Carya illinoinensis HOM05D000010 ORTHO05D126879 3.5e-06 56.2 141 35.5
Lj1A1029G62 Lonicera japonica HOM05D000010 ORTHO05D000063 4.6e-06 55.8 196 29.1
CAN.G65.148 Capsicum annuum HOM05D000010 ORTHO05D000063 6.0e-06 55.5 210 25.2
Cpa.g.sc202.6 Carica papaya HOM05D000010 ORTHO05D000063 6.0e-06 55.5 133 33.1


User provided reference genes

Program Settings