Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 3.1e-110 404.1 960 100.0
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 5.0e-52 210.7 243 86.8
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 1.4e-41 176.0 241 76.8
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 5.2e-41 174.1 241 76.8
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 2.4e-38 165.2 240 75.0
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 9.2e-38 163.3 244 75.8
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 1.6e-37 162.5 241 75.5
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 1.6e-37 162.5 243 75.7
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 1.2e-34 152.9 243 74.5
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 2.8e-34 151.8 251 48.2
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 1.4e-33 149.4 241 71.4
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 5.2e-33 147.5 239 71.5
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 1.5e-32 146.0 241 71.8
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 2.6e-32 145.2 265 42.3
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 2.6e-32 145.2 243 72.0
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 3.4e-32 144.8 243 72.0
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 7.5e-32 143.7 238 71.4
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 1.3e-31 142.9 246 71.5
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 1.3e-31 142.9 240 72.5
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 2.9e-31 141.7 243 71.6
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 3.7e-31 141.4 252 50.0
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 1.9e-30 139.0 252 52.4
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 2.4e-30 138.7 241 69.3
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 2.4e-30 138.7 241 69.3
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 3.2e-30 138.3 240 72.5
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 3.2e-30 138.3 240 72.5
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 9.2e-30 136.7 247 70.0
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 1.2e-29 136.3 227 76.2
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 3.5e-29 134.8 241 70.5
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 3.9e-28 131.3 239 72.0
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 8.6e-28 130.2 255 47.5
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 1.9e-27 129.0 239 70.3
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 3.3e-27 128.3 239 69.9
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 8.0e-26 123.6 80 67.5
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 1.4e-25 122.9 239 69.9
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 1.8e-25 122.5 73 74.0
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 3.1e-25 121.7 242 68.2
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 1.5e-24 119.4 250 40.8
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 2.9e-23 115.2 259 45.9
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 1.1e-22 113.2 71 73.2
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.2e-21 109.8 80 58.8
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.2e-21 109.8 253 37.9
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 1.6e-21 109.4 80 61.2
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 1.6e-21 109.4 251 41.0
CsaV3_2G035920 Cucumis sativus L. HOM05D021906 ORTHO05D009365 4.6e-21 107.8 70 68.6
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 7.8e-21 107.1 253 39.5
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 1.0e-20 106.7 110 48.2
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 1.0e-20 106.7 80 60.0
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 2.3e-20 105.5 276 34.8
MELO3C024749.2 Cucumis melo HOM05D021906 ORTHO05D009365 2.3e-20 105.5 70 68.6
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 3.0e-20 105.1 254 65.7
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 6.6e-20 104.0 214 73.4
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 1.5e-19 102.8 244 37.3
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 1.9e-19 102.4 249 36.5
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 5.6e-19 100.9 243 33.3
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 9.5e-19 100.1 67 71.6
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 2.1e-18 99.0 84 53.6
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 3.6e-18 98.2 80 56.2
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 6.2e-18 97.4 250 36.4
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 1.8e-17 95.9 76 55.3
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 4.0e-17 94.7 81 51.9
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 1.5e-16 92.8 77 50.6
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 9.2e-14 83.6 253 39.1
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 1.2e-13 83.2 47 72.3
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 2.1e-13 82.4 251 39.4
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 6.0e-13 80.9 83 50.6
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 1.0e-12 80.1 83 49.4
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 1.0e-12 80.1 80 48.8
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 1.0e-12 80.1 251 60.2
Aa31LG11G14690 Aethionema arabicum HOM05D007570 ORTHO05D009365 3.9e-12 78.2 69 50.7
FAN10G4006 Fragaria x ananassa HOM05D007570 ORTHO05D009365 3.9e-12 78.2 73 60.3
GSVIVG01013840001 Vitis vinifera HOM05D007570 ORTHO05D009365 1.1e-11 76.6 47 72.3
Lj5C430G10 Lonicera japonica HOM05D007570 ORTHO05D009365 4.3e-11 74.7 45 71.1
AT5G14770 Arabidopsis thaliana HOM05D007570 ORTHO05D009365 7.3e-11 73.9 71 49.3
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 7.3e-11 73.9 71 49.3
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 7.3e-11 73.9 59 59.3
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 1.6e-10 72.8 71 47.9
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 1.6e-10 72.8 257 27.6
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 2.1e-10 72.4 71 47.9
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 2.1e-10 72.4 71 47.9
ATR0680G349 Amborella trichopoda HOM05D007570 ORTHO05D009365 2.8e-10 72.0 258 59.7
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 2.8e-10 72.0 69 49.3
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 3.6e-10 71.6 69 49.3
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 3.6e-10 71.6 69 49.3
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 4.7e-10 71.2 70 48.6
AUR62020702 Chenopodium quinoa HOM05D007570 ORTHO05D009365 8.1e-10 70.5 71 49.3
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 8.1e-10 70.5 47 63.8
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 2.4e-09 68.9 71 47.9
CDE06G1092 Ceratophyllum demersum HOM05D007570 ORTHO05D008530 2.4e-09 68.9 223 62.8
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 5.2e-09 67.8 55 63.6
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 8.9e-09 67.0 46 63.0
Zm00001eb074990 Zea mays HOM05D051871 ORTHO05D014237 1.5e-08 66.2 89 41.6
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 2.6e-08 65.5 46 63.0
SalBow3G4252 Salvia bowleyana HOM05D007570 ORTHO05D009365 2.6e-08 65.5 46 52.2
ClCG02G007820 Citrullus lanatus HOM05D021906 ORTHO05D009365 5.8e-08 64.3 48 60.4
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 9.9e-08 63.5 45 57.8
Glyma.13G181601 Glycine max HOM05D007570 ORTHO05D009365 9.9e-08 63.5 48 62.5
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 1.3e-07 63.2 46 58.7
arahy.Tifrunner.gnm1.ann1.9J2UZB Arachis hypogaea HOM05D021906 ORTHO05D009365 6.4e-07 60.8 53 58.5
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 6.4e-07 60.8 43 60.5
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 1.4e-06 59.7 241 52.7
HPP92_019906 Vanilla planifolia HOM05D007063 ORTHO05D008822 9.3e-06 57.0 74 39.2


User provided reference genes

Program Settings