Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 6.2e-177 624.0 314 100.0
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 6.8e-99 364.8 305 66.2
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 8.9e-99 364.4 287 68.6
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.7e-97 360.1 286 66.4
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 1.9e-93 346.7 301 63.8
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 3.1e-91 339.3 280 67.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 4.6e-71 272.3 275 56.4
Haze_00441 Corylus avellana HOM05D000125 ORTHO05D010101 3.6e-68 262.7 287 55.4
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 2.9e-65 253.1 297 49.2
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 9.9e-58 228.0 298 47.3
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 9.3e-56 221.5 290 44.8
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 2.1e-55 220.3 281 46.3
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 1.3e-54 217.6 275 46.5
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 3.9e-54 216.1 290 45.9
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 5.1e-54 215.7 301 44.9
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 3.4e-50 203.0 304 44.1
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 5.5e-48 195.7 253 45.1
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 2.7e-47 193.4 253 44.7
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 3.1e-43 179.9 255 44.3
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 2.5e-37 160.2 355 36.1
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 8.2e-36 155.2 251 40.2
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 5.3e-35 152.5 253 37.2
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 1.0e-33 148.3 158 54.4
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 4.2e-32 142.9 341 32.6
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.1e-31 140.6 325 32.9
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 2.6e-26 123.6 338 29.6
Cfa021111 Carpinus fangiana HOM05D000125 ORTHO05D000120 3.4e-26 123.2 116 61.2
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.0e-18 97.4 137 41.6
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.0e-18 97.4 336 27.1
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 2.6e-18 97.1 191 29.8
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 2.6e-18 97.1 106 51.9
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.9e-18 95.9 138 41.3
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.9e-17 93.6 185 30.3
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 8.5e-17 92.0 212 29.2
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 8.5e-17 92.0 197 29.9
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-16 91.3 137 40.1
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 1.9e-16 90.9 291 26.1
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 7.2e-16 89.0 203 27.6
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 1.6e-15 87.8 299 26.4
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 1.6e-15 87.8 235 29.8
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.6e-15 87.8 347 24.5
CANSAT11G0780 Cannabis sativa HOM05D000125 ORTHO05D010101 3.6e-15 86.7 250 26.8
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 6.1e-15 85.9 213 31.0
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 7.9e-15 85.5 161 32.3
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-14 84.7 100 44.0
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 2.3e-14 84.0 281 27.8
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-14 83.6 120 38.3
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-14 83.6 180 31.7
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 3.3e-13 80.1 167 32.9
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 3.3e-13 80.1 167 32.9
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 9.7e-13 78.6 135 36.3
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 9.7e-13 78.6 131 35.1
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 1.3e-12 78.2 159 30.8
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 2.2e-12 77.4 242 26.9
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 1.4e-11 74.7 206 27.2
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 3.1e-11 73.6 153 30.7
CANSAT11G0949 Cannabis sativa HOM05D000125 ORTHO05D010101 5.3e-11 72.8 189 28.6
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 7.0e-11 72.4 217 23.0
CANSAT11G0715 Cannabis sativa HOM05D000125 ORTHO05D000120 2.0e-10 70.9 225 27.6
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.6e-10 70.5 192 27.6
CANSAT11G2639 Cannabis sativa HOM05D000125 ORTHO05D010101 3.5e-10 70.1 188 26.1
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 3.5e-10 70.1 110 31.8
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.5e-10 69.7 230 26.5
CANSAT11G2064 Cannabis sativa HOM05D000125 ORTHO05D010101 4.5e-10 69.7 211 27.5
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 7.7e-10 68.9 165 26.7
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 1.7e-09 67.8 92 42.4
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 2.2e-09 67.4 203 27.6
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 6.5e-09 65.9 192 25.5
CANSAT11G2286 Cannabis sativa HOM05D000125 ORTHO05D010101 6.5e-09 65.9 92 41.3
QL09p045403 Quercus lobata HOM05D000125 ORTHO05D010101 6.5e-09 65.9 173 32.4
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.5e-08 64.7 181 26.0
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.5e-08 63.9 226 26.1
CANSAT11G0087 Cannabis sativa HOM05D000125 ORTHO05D000120 7.2e-08 62.4 163 28.8
CANSAT78G1599 Cannabis sativa HOM05D000125 ORTHO05D000120 1.2e-07 61.6 266 28.2
CANSAT01G1477 Cannabis sativa HOM05D000125 ORTHO05D010101 4.7e-07 59.7 262 23.7
CANSAT54G0137 Cannabis sativa HOM05D000125 ORTHO05D000120 4.7e-07 59.7 286 21.7
CANSAT11G1144 Cannabis sativa HOM05D000125 ORTHO05D010101 3.0e-06 57.0 262 27.5


User provided reference genes

Program Settings