Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 6.2e-32 140.2 72 100.0
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 2.0e-22 108.6 58 93.1
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 4.3e-17 90.9 57 78.9
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 2.9e-13 78.2 61 68.9
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.2e-12 74.3 63 65.1
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 2.7e-11 71.6 57 63.2
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 7.9e-11 70.1 53 66.0
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 7.9e-11 70.1 57 68.4
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 7.9e-11 70.1 55 67.3
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.9e-10 67.8 51 68.6
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 3.9e-10 67.8 56 62.5
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 5.1e-10 67.4 53 64.2
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 6.7e-10 67.0 53 67.9
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 6.7e-10 67.0 53 62.3
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 8.8e-10 66.6 57 63.2
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 8.8e-10 66.6 50 66.0
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 8.8e-10 66.6 50 66.0
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 8.8e-10 66.6 55 63.6
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.1e-09 66.2 52 67.3
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 1.1e-09 66.2 53 64.2
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 1.5e-09 65.9 58 60.3
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 2.0e-09 65.5 53 62.3
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 2.5e-09 65.1 58 58.6
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 3.3e-09 64.7 51 66.7
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.3e-09 64.7 51 66.7
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.3e-09 64.7 51 66.7
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 3.3e-09 64.7 57 61.4
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 4.3e-09 64.3 51 66.7
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 5.7e-09 63.9 53 60.4
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 7.4e-09 63.5 58 58.6
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 7.4e-09 63.5 52 65.4
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 1.7e-08 62.4 57 56.1
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.7e-08 62.4 57 57.9
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 2.8e-08 61.6 51 62.7
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 2.8e-08 61.6 56 53.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 3.7e-08 61.2 57 56.1
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 1.1e-07 59.7 57 57.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 1.4e-07 59.3 47 68.1
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.8e-07 58.9 47 68.1
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 2.4e-07 58.5 56 53.6
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.1e-07 58.2 57 56.1
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 5.3e-07 57.4 58 48.3
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 5.3e-07 57.4 52 59.6
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 5.3e-07 57.4 55 58.2
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 5.3e-07 57.4 59 55.9
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 1.2e-06 56.2 41 68.3
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.5e-06 55.8 47 59.6
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 2.0e-06 55.5 53 54.7
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 2.0e-06 55.5 58 46.6
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 3.4e-06 54.7 57 43.9
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 4.5e-06 54.3 58 46.6
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 5.9e-06 53.9 64 53.1
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 5.9e-06 53.9 54 59.3
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 7.7e-06 53.5 54 57.4


User provided reference genes

Program Settings