Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 6.4e-117 424.1 214 100.0
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 1.2e-46 190.7 122 81.1
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 1.2e-46 190.7 122 81.1
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 2.5e-44 183.0 119 82.4
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 9.8e-41 171.0 124 72.6
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 3.0e-37 159.5 122 69.7
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 6.6e-37 158.3 129 69.8
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 1.5e-36 157.1 124 70.2
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 4.3e-36 155.6 124 71.0
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.2e-35 154.1 119 71.4
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 3.6e-35 152.5 127 68.5
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 4.7e-35 152.1 124 66.1
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 1.8e-34 150.2 115 71.3
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.8e-34 150.2 124 66.9
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 3.1e-34 149.4 125 70.4
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 4.0e-34 149.1 121 67.8
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 6.8e-34 148.3 124 66.1
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 8.9e-34 147.9 122 64.8
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.2e-33 147.5 119 67.2
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.2e-33 147.5 123 69.1
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 2.6e-33 146.4 128 63.3
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 3.4e-33 146.0 120 65.8
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 7.5e-33 144.8 125 68.0
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 7.5e-33 144.8 125 68.0
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 9.8e-33 144.4 149 56.4
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 1.3e-32 144.1 106 72.6
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.3e-32 144.1 124 65.3
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 1.7e-32 143.7 104 72.1
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 2.9e-32 142.9 119 66.4
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 8.3e-32 141.4 124 62.9
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 8.3e-32 141.4 126 66.7
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.1e-31 141.0 126 66.7
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 1.2e-30 137.5 124 62.9
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.6e-30 137.1 129 62.8
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.7e-30 136.3 129 63.6
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.7e-30 136.3 129 63.6
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 3.5e-30 136.0 125 63.2
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 3.5e-30 136.0 125 63.2
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 3.5e-30 136.0 127 61.4
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 6.0e-30 135.2 124 62.1
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 6.0e-30 135.2 126 61.1
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 7.8e-30 134.8 105 68.6
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.0e-29 134.4 122 63.9
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 1.0e-29 134.4 107 66.4
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 5.0e-29 132.1 105 66.7
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 5.0e-29 132.1 109 68.8
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 5.0e-29 132.1 120 61.7
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 6.6e-29 131.7 122 56.6
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 8.6e-29 131.3 124 61.3
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 8.6e-29 131.3 108 68.5
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.5e-28 130.6 107 61.7
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 3.3e-28 129.4 108 68.5
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 5.6e-28 128.6 102 70.6
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 5.6e-28 128.6 127 59.8
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 7.3e-28 128.3 112 64.3
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 9.5e-28 127.9 120 62.5
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 2.1e-27 126.7 124 58.9
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.1e-27 126.7 124 58.9
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 2.8e-27 126.3 120 59.2
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 3.6e-27 125.9 98 68.4
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 3.6e-27 125.9 126 61.9
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 3.6e-27 125.9 101 68.3
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 4.7e-27 125.6 124 58.1
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 6.2e-27 125.2 127 59.1
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 8.1e-27 124.8 125 58.4
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 8.1e-27 124.8 152 50.7
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 1.1e-26 124.4 107 61.7
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 2.3e-26 123.2 157 51.6
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 2.3e-26 123.2 124 58.9
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 2.3e-26 123.2 122 58.2
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 3.1e-26 122.9 78 80.8
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 3.1e-26 122.9 78 80.8
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 5.2e-26 122.1 77 79.2
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 5.2e-26 122.1 77 79.2
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 6.8e-26 121.7 120 55.0
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 8.9e-26 121.3 120 53.3
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 8.9e-26 121.3 120 53.3
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 8.9e-26 121.3 104 63.5
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.2e-25 120.9 98 64.3
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.5e-25 120.6 118 57.6
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 3.4e-25 119.4 120 53.3
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 4.4e-25 119.0 120 53.3
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 5.8e-25 118.6 120 52.5
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 7.5e-25 118.2 120 54.2
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 9.8e-25 117.9 120 51.7
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 1.3e-24 117.5 129 58.1
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 2.2e-24 116.7 124 54.0
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 4.9e-24 115.5 121 52.9
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 4.9e-24 115.5 121 52.9
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 4.9e-24 115.5 121 52.9
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 4.9e-24 115.5 76 77.6
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.4e-23 113.2 113 59.3
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 1.6e-22 110.5 108 59.3
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 2.7e-22 109.8 120 52.5
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.7e-22 109.8 120 55.0
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 3.5e-22 109.4 122 52.5
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 4.6e-22 109.0 105 59.0
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 7.8e-22 108.2 105 59.0
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 3.9e-21 105.9 89 60.7
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 6.6e-21 105.1 120 52.5
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 6.6e-21 105.1 85 67.1
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 8.6e-21 104.8 107 57.0
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 1.1e-20 104.4 137 54.0
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 2.8e-19 99.8 113 52.2
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.5e-17 94.0 127 48.8
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 2.7e-14 83.2 70 60.0
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 7.8e-14 81.6 127 44.1
Haze_00617 Corylus avellana HOM05D000193 ORTHO05D002695 1.7e-13 80.5 75 61.3
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.5e-12 77.4 77 58.4
TAR362G1004 Trochodendron aralioides HOM05D007045 ORTHO05D008872 2.9e-08 63.2 53 66.0
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 4.2e-07 59.3 125 35.2
CBR_g50944 Chara braunii HOM05D007045 ORTHO05D008872 6.0e-06 55.5 142 35.9
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 7.8e-06 55.1 120 39.2


User provided reference genes

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