Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.9e-30 135.2 69 100.0
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 2.7e-24 114.8 70 87.1
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.3e-15 85.1 78 67.9
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.3e-15 85.1 78 67.9
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 8.1e-13 76.6 69 69.6
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 2.4e-12 75.1 69 68.1
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 1.5e-11 72.4 72 58.3
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.3e-10 69.3 74 56.8
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 6.4e-10 67.0 77 54.5
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 6.4e-10 67.0 77 54.5
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 8.4e-10 66.6 76 56.6
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 1.1e-09 66.2 74 55.4
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.4e-09 65.9 73 50.7
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.4e-09 65.9 73 57.5
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.4e-09 63.9 73 53.4
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.4e-09 63.9 73 53.4
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 1.2e-08 62.8 69 50.7
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 6.0e-08 60.5 74 45.9
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 6.0e-08 60.5 69 52.2
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 7.9e-08 60.1 75 54.7
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 1.0e-07 59.7 71 54.9
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 3.0e-07 58.2 66 51.5
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.0e-07 58.2 76 50.0
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.9e-07 57.8 78 50.0
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 6.7e-07 57.0 60 50.0
THA.LOC104809237 Tarenaya hassleriana HOM05D013984 ORTHO05D010089 6.7e-07 57.0 61 57.4
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.7e-07 56.6 76 48.7
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.7e-07 56.6 76 48.7
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.1e-06 56.2 78 44.9
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 1.9e-06 55.5 68 52.9
Gohir.A12G141700 Gossypium hirsutum HOM05D008114 ORTHO05D010089 2.5e-06 55.1 44 61.4
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 2.5e-06 55.1 74 48.6
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.3e-06 54.7 70 58.6
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 3.3e-06 54.7 77 48.1
Gohir.D12G146500 Gossypium hirsutum HOM05D008114 ORTHO05D010089 3.3e-06 54.7 44 59.1
Lj5g0005791 Lotus japonicus HOM05D021627 ORTHO05D021511 5.6e-06 53.9 60 48.3
Aa31LG4G11900 Aethionema arabicum HOM05D013984 ORTHO05D010089 7.4e-06 53.5 64 50.0
Gorai.008G157800 Gossypium raimondii HOM05D008114 ORTHO05D010089 7.4e-06 53.5 44 59.1
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 9.6e-06 53.1 76 47.4
TPR.G4885 Trifolium pratense HOM05D021627 ORTHO05D021511 9.6e-06 53.1 67 49.3


User provided reference genes

Program Settings