Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 6.7e-296 1020.0 540 100.0
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 3.9e-280 967.6 540 95.2
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 2.4e-216 755.7 543 76.8
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 5.8e-207 724.5 541 73.4
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 2.5e-157 559.7 542 58.5
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.1e-156 556.6 549 59.7
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.1e-152 544.3 550 56.9
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 4.7e-148 528.9 543 57.5
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 4.4e-146 522.3 542 57.2
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 9.7e-146 521.2 541 56.6
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 4.8e-145 518.8 548 56.2
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.4e-144 516.5 577 53.0
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 7.0e-144 515.0 540 56.1
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 9.1e-144 514.6 543 56.4
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.2e-142 510.0 542 56.5
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 3.8e-142 509.2 556 55.0
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 7.2e-141 505.0 545 53.6
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 7.5e-138 495.0 585 53.0
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 5.9e-135 485.3 610 48.7
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 7.7e-135 485.0 578 51.6
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 1.3e-134 484.2 610 50.0
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.3e-134 483.4 540 54.8
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.5e-133 480.7 540 54.6
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.7e-132 475.7 609 47.8
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 1.8e-131 473.8 603 49.4
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 4.9e-129 465.7 514 53.1
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 3.1e-128 463.0 582 50.5
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 5.4e-128 462.2 477 56.2
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.6e-127 460.7 549 51.4
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.3e-126 457.6 540 50.7
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.3e-126 457.6 548 50.5
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.3e-126 457.6 539 52.9
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.5e-125 454.1 571 49.0
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 2.5e-125 453.4 546 50.7
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 3.6e-124 449.5 545 51.9
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.0e-122 443.7 543 50.8
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 8.3e-121 438.3 622 45.5
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 1.2e-119 434.5 552 49.1
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 3.5e-119 433.0 645 45.6
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 2.8e-116 423.3 551 49.2
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 6.2e-116 422.2 557 49.2
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 1.1e-115 421.4 542 47.2
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.2e-114 417.9 543 48.4
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 5.8e-114 415.6 542 47.4
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 1.7e-113 414.1 537 47.9
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 4.9e-113 412.5 565 48.5
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 3.2e-112 409.8 550 48.7
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 1.6e-111 407.5 543 48.6
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.3e-110 404.4 544 47.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.5e-109 401.0 609 45.3
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.9e-109 400.6 552 47.5
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 1.9e-109 400.6 543 47.0
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 4.7e-108 396.0 542 45.6
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 8.1e-108 395.2 548 44.9
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.2e-106 391.3 551 47.4
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.4e-106 389.8 547 44.1
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 5.8e-106 389.0 608 43.3
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 7.5e-106 388.7 572 43.4
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 1.7e-102 377.5 551 45.7
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 1.5e-101 374.4 548 44.3
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 5.6e-101 372.5 548 44.9
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.5e-98 364.4 552 43.1
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.4e-98 363.2 540 45.0
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 4.9e-97 359.4 541 45.3
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 1.2e-95 354.8 592 43.2
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 3.9e-94 349.7 568 43.1
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 6.0e-87 325.9 565 40.9
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.0e-86 325.1 548 38.5
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 4.8e-84 316.2 555 40.4
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 9.0e-83 312.0 544 40.1
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.5e-82 311.2 377 51.5
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.9e-80 304.3 523 40.2
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 6.7e-78 295.8 565 39.8
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 6.9e-75 285.8 557 40.0
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 2.6e-74 283.9 467 42.0
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 4.5e-74 283.1 466 41.2
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 5.8e-74 282.7 548 35.8
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 1.4e-72 278.1 467 43.0
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 5.5e-72 276.2 471 43.1
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 7.9e-71 272.3 462 41.6
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 7.7e-58 229.2 469 38.6
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 2.5e-53 214.2 429 41.5
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.5e-41 172.9 177 57.1
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 2.3e-38 164.5 462 30.1
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 3.3e-37 160.6 170 55.9
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.2e-36 157.9 172 49.4
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.2e-36 157.9 172 49.4
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.1e-35 154.1 355 35.2
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 7.7e-34 149.4 533 26.3
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.0e-33 149.1 399 28.8
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 6.5e-33 146.4 226 41.2
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 9.4e-32 142.5 128 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.6e-26 125.2 429 30.8
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 3.5e-26 124.0 347 32.3
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.1e-24 119.0 173 45.1
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 4.2e-24 117.1 565 24.4
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 1.7e-17 95.1 78 65.4
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 7.0e-11 73.2 749 21.4
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 2.7e-10 71.2 73 53.4
Sabra14G0056200 Salix brachista HOM05D002884 ORTHO05D003178 6.8e-06 56.6 70 40.0
Sed0012052 Sechium edule HOM05D002884 ORTHO05D003178 6.8e-06 56.6 80 33.8


User provided reference genes

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