Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015746 Carpinus fangiana HOM05D009101 ORTHO05D011226 4.2e-102 374.8 202 100.0
CiPaw.01G127500 Carya illinoinensis HOM05D009101 ORTHO05D011226 1.6e-56 223.4 203 70.9
QL06p014659 Quercus lobata HOM05D009101 ORTHO05D011226 6.9e-36 154.8 195 56.4
Eucgr.H04137 Eucalyptus grandis HOM05D009101 ORTHO05D011226 1.3e-29 134.0 138 58.7
Nn4g25278 Nelumbo nucifera HOM05D009101 ORTHO05D011226 2.4e-28 129.8 92 77.2
Atru.chr4.3183 Acer truncatum HOM05D009101 ORTHO05D011226 3.4e-27 125.9 133 62.4
Ciclev10005889m.g Citrus clementina HOM05D009101 ORTHO05D011226 3.4e-27 125.9 104 70.2
ATR0796G016 Amborella trichopoda HOM05D009101 ORTHO05D011226 2.9e-26 122.9 146 52.7
PGR004G1430 Punica granatum HOM05D009101 ORTHO05D011226 6.4e-26 121.7 128 60.2
MBI18_g39665_MAGBIO Magnolia biondii HOM05D009101 ORTHO05D011226 1.1e-25 120.9 177 51.4
Dinv29494 Davidia involucrata HOM05D009101 ORTHO05D011226 3.2e-25 119.4 150 52.0
Phvul.009G220900 Phaseolus vulgaris HOM05D009101 ORTHO05D011226 1.2e-24 117.5 129 57.4
Potri.010G003700 Populus trichocarpa HOM05D009101 ORTHO05D011226 1.2e-24 117.5 125 61.6
VMungo1309G0395 Vigna mungo HOM05D009101 ORTHO05D011226 1.6e-24 117.1 129 57.4
RcHm_v2.0_Chr4g0427931 Rosa chinensis HOM05D009101 ORTHO05D011226 2.1e-24 116.7 163 50.3
FvH4_4g21731 Fragaria vesca HOM05D009101 ORTHO05D011226 2.7e-24 116.3 187 46.5
Glyma.09G080400 Glycine max HOM05D009101 ORTHO05D011226 7.9e-24 114.8 107 61.7
FAN12G1764 Fragaria x ananassa HOM05D009101 ORTHO05D011226 1.3e-23 114.0 185 44.9
RcHm_v2.0_Chr4g0427961 Rosa chinensis HOM05D009101 ORTHO05D011226 3.0e-23 112.8 162 50.6
CANSAT78G2401 Cannabis sativa HOM05D009101 ORTHO05D011226 2.5e-22 109.8 103 61.2
PSO170G1471 Papaver somniferum HOM05D009101 ORTHO05D011226 5.6e-22 108.6 165 46.7
Lalb_Chr08g0232991 Lupinus albus HOM05D009101 ORTHO05D011226 9.6e-22 107.8 143 51.0
GSVIVG01017702001 Vitis vinifera HOM05D009101 ORTHO05D011226 1.3e-21 107.5 93 67.7
MD16G1133700 Malus domestica HOM05D009101 ORTHO05D011226 4.8e-21 105.5 127 55.1
Medtr2g045060 Medicago truncatula HOM05D009101 ORTHO05D011226 3.4e-19 99.4 143 46.2
Oeu002209.1 Olea europaea HOM05D009101 ORTHO05D011226 5.8e-19 98.6 125 52.8
FAN07G2413 Fragaria x ananassa HOM05D009101 ORTHO05D011226 2.2e-18 96.7 203 40.9
Glyma.15G185900 Glycine max HOM05D009101 ORTHO05D011226 6.5e-18 95.1 106 58.5
Hma1.2p1_1067F.1_g253870 Hydrangea macrophylla HOM05D009101 ORTHO05D011226 1.9e-17 93.6 120 52.5
Actinidia08061 Actinidia chinensis HOM05D009101 ORTHO05D011226 5.5e-17 92.0 161 42.9
Psat1g017160 Pisum sativum HOM05D009101 ORTHO05D011226 9.3e-17 91.3 115 51.3
Rhsim12G0024800 Rhododendron simsii HOM05D009101 ORTHO05D011226 3.5e-16 89.4 127 48.8
MD13G1137900 Malus domestica HOM05D009101 ORTHO05D011226 1.0e-15 87.8 124 49.2
Ca_02328_v3 Cicer arietinum L. HOM05D009101 ORTHO05D011226 6.7e-15 85.1 74 67.6
SEGI_22717 Sequoiadendron giganteum HOM05D009101 ORTHO05D011226 3.7e-13 79.3 83 51.8
Os05g0137600 Oryza sativa ssp. japonica HOM05D009101 ORTHO05D011226 2.4e-12 76.6 76 57.9
Mapoly0132s0020 Marchantia polymorpha HOM05D002994 ORTHO05D003337 2.7e-08 63.2 139 35.3
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 6.1e-08 62.0 81 43.2
Gohir.D11G250500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 1.5e-06 57.4 82 39.0
Gorai.007G268600 Gossypium raimondii HOM05D002994 ORTHO05D003337 1.5e-06 57.4 82 39.0
AagrBONN_evm.TU.Sc2ySwM_117.294 Anthoceros agrestis HOM05D002994 ORTHO05D003337 3.3e-06 56.2 84 41.7
Sed0012175 Sechium edule HOM05D002994 ORTHO05D003337 3.3e-06 56.2 80 41.2
TWI74G0568 Tripterygium wilfordii HOM05D002994 ORTHO05D003337 3.3e-06 56.2 123 35.8
MELO3C012902.2 Cucumis melo HOM05D002994 ORTHO05D003337 5.7e-06 55.5 80 41.2
CsaV3_3G022500 Cucumis sativus L. HOM05D002994 ORTHO05D003337 7.4e-06 55.1 80 40.0
Duzib177G0745 Durio zibethinus HOM05D002994 ORTHO05D003337 7.4e-06 55.1 63 44.4
SEGI_02150 Sequoiadendron giganteum HOM05D002994 ORTHO05D003337 7.4e-06 55.1 83 39.8
Solyc05g051770.3 Solanum lycopersicum HOM05D002994 ORTHO05D003337 9.7e-06 54.7 113 36.3
Sopen05g030240 Solanum pennellii HOM05D002994 ORTHO05D003337 9.7e-06 54.7 114 36.8


User provided reference genes

Program Settings