Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015674 Carpinus fangiana HOM05D007605 ORTHO05D009572 7.3e-30 133.3 69 100.0
Haze_00851 Corylus avellana HOM05D007605 ORTHO05D009572 3.6e-29 131.0 69 98.6
CANSAT01G0287 Cannabis sativa HOM05D007605 ORTHO05D009572 1.2e-24 115.9 69 81.2
Lj6g0016727 Lotus japonicus HOM05D007605 ORTHO05D009572 8.6e-23 109.8 69 79.7
Potri.019G096700 Populus trichocarpa HOM05D007605 ORTHO05D009572 1.5e-22 109.0 66 81.8
VMungo1383G0010 Vigna mungo HOM05D003647 ORTHO05D004182 1.5e-22 109.0 67 83.6
Potri.019G096500 Populus trichocarpa HOM05D007605 ORTHO05D009572 1.9e-22 108.6 64 82.8
MD03G1210800 Malus domestica HOM05D007605 ORTHO05D009572 2.5e-22 108.2 69 78.3
Prupe.4G204500 Prunus persica HOM05D007605 ORTHO05D009572 2.5e-22 108.2 69 76.8
Rhsim09G0008600 Rhododendron simsii HOM05D007605 ORTHO05D009572 2.5e-22 108.2 69 82.6
Ca_14651_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 3.3e-22 107.8 69 79.7
Lj6g0006319 Lotus japonicus HOM05D007605 ORTHO05D009572 3.3e-22 107.8 69 78.3
RcHm_v2.0_Chr4g0405791 Rosa chinensis HOM05D007605 ORTHO05D009572 3.3e-22 107.8 69 78.3
FAN05G3507 Fragaria x ananassa HOM05D007605 ORTHO05D009572 5.6e-22 107.1 69 76.8
Nn1g09550 Nelumbo nucifera HOM05D007605 ORTHO05D009572 5.6e-22 107.1 67 79.1
Sabra19G0108500 Salix brachista HOM05D000005 ORTHO05D000012 5.6e-22 107.1 66 80.3
Ca_08431_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 7.3e-22 106.7 69 78.3
Glyma.18G297600 Glycine max HOM05D007605 ORTHO05D009572 7.3e-22 106.7 69 79.7
Lj1g0002800 Lotus japonicus HOM05D007605 ORTHO05D009572 7.3e-22 106.7 69 76.8
Medtr7g091060 Medicago truncatula HOM05D007605 ORTHO05D009572 7.3e-22 106.7 69 78.3
TWI63G1406 Tripterygium wilfordii HOM05D007605 ORTHO05D009572 9.6e-22 106.3 67 83.6
arahy.Tifrunner.gnm1.ann1.FBG7WK Arachis hypogaea HOM05D007605 ORTHO05D009572 1.2e-21 105.9 70 81.4
Lj1g0021920 Lotus japonicus HOM05D007605 ORTHO05D009572 1.2e-21 105.9 69 76.8
Ciclev10023247m.g Citrus clementina HOM05D007605 ORTHO05D009572 1.6e-21 105.5 60 85.0
FAN05G0946 Fragaria x ananassa HOM05D007605 ORTHO05D009572 1.6e-21 105.5 68 75.0
FAN14G0446 Fragaria x ananassa HOM05D007605 ORTHO05D009572 1.6e-21 105.5 69 75.4
RcHm_v2.0_Chr7g0232231 Rosa chinensis HOM05D007605 ORTHO05D009572 1.6e-21 105.5 69 76.8
Thecc.04G164300 Theobroma cacao HOM05D007605 ORTHO05D009572 1.6e-21 105.5 69 82.6
Duzib212G0337 Durio zibethinus HOM05D007605 ORTHO05D009572 2.1e-21 105.1 69 82.6
Nitab4.5_0004700g0030 Nicotiana tabacum HOM05D001130 ORTHO05D001052 2.1e-21 105.1 67 79.1
PGR142G0642 Punica granatum HOM05D007605 ORTHO05D009572 2.8e-21 104.8 66 77.3
MD11G1225700 Malus domestica HOM05D007605 ORTHO05D009572 4.7e-21 104.0 69 75.4
Nitab4.5_0007474g0060 Nicotiana tabacum HOM05D007605 ORTHO05D009572 4.7e-21 104.0 67 77.6
SGA_v2.0_scaffold25G11005 Striga asiatica HOM05D000384 ORTHO05D009572 4.7e-21 104.0 69 75.4
arahy.Tifrunner.gnm1.ann1.MPL0H7 Arachis hypogaea HOM05D007605 ORTHO05D009572 6.2e-21 103.6 68 80.9
Atru.chr4.1455 Acer truncatum HOM05D007605 ORTHO05D009572 8.1e-21 103.2 60 83.3
FvH4_6g21131 Fragaria vesca HOM05D007605 ORTHO05D009572 8.1e-21 103.2 67 74.6
Glyma.08G364500 Glycine max HOM05D007605 ORTHO05D009572 8.1e-21 103.2 69 76.8
Sabra13G0106700 Salix brachista HOM05D007605 ORTHO05D009572 1.1e-20 102.8 66 78.8
Cpa.g.sc9.378 Carica papaya HOM05D007605 ORTHO05D009572 1.4e-20 102.4 69 78.3
MELO3C011854.2 Cucumis melo HOM05D007605 ORTHO05D009572 1.4e-20 102.4 60 85.0
CiPaw.01G168900 Carya illinoinensis HOM05D007605 ORTHO05D009572 1.8e-20 102.1 61 85.2
Psat3g074320 Pisum sativum HOM05D007605 ORTHO05D009572 1.8e-20 102.1 69 75.4
SalBow6G4154 Salvia bowleyana HOM05D007605 ORTHO05D009572 2.4e-20 101.7 69 72.5
Peaxi162Scf00579g00018 Petunia axillaris HOM05D007605 ORTHO05D009572 3.1e-20 101.3 67 76.1
Sc13g0006890 Simmondsia chinensis HOM05D007605 ORTHO05D009572 3.1e-20 101.3 63 81.0
THA.LOC104802329 Tarenaya hassleriana HOM05D007605 ORTHO05D009572 3.1e-20 101.3 69 76.8
COL.COLO4_38114 Corchorus olitorius HOM05D007605 ORTHO05D009572 4.0e-20 100.9 58 86.2
Sopen06g018580 Solanum pennellii HOM05D007605 ORTHO05D009572 4.0e-20 100.9 67 74.6
TPR.G18242 Trifolium pratense HOM05D007605 ORTHO05D009572 4.0e-20 100.9 70 77.1
Migut.N03059 Erythranthe guttata HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 73.9
Eucgr.H04449 Eucalyptus grandis HOM05D007605 ORTHO05D009572 5.2e-20 100.5 58 87.9
Gohir.A10G144600 Gossypium hirsutum HOM05D007605 ORTHO05D009572 5.2e-20 100.5 58 86.2
PGSC0003DMG400016297 Solanum tuberosum HOM05D007605 ORTHO05D009572 5.2e-20 100.5 67 74.6
Ah.07g202920 Amaranthus hybridus HOM05D007605 ORTHO05D009572 6.9e-20 100.1 55 85.5
Phvul.008G005000 Phaseolus vulgaris HOM05D007605 ORTHO05D009572 6.9e-20 100.1 69 75.4
CSS0027032 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 2.0e-19 98.6 57 86.0
CSS0028313 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 2.0e-19 98.6 57 86.0
Aqoxy4G02871 Aquilegia oxysepala HOM05D007605 ORTHO05D009572 3.4e-19 97.8 59 79.7
Carub.0004s2631 Capsella rubella HOM05D007605 ORTHO05D009572 4.4e-19 97.4 69 73.9
DCAR_030842 Daucus carota HOM05D007605 ORTHO05D009572 4.4e-19 97.4 64 73.4
Sed0018718 Sechium edule HOM05D007605 ORTHO05D009572 4.4e-19 97.4 60 80.0
Sp4g25850 Schrenkiella parvula HOM05D007605 ORTHO05D009572 7.6e-19 96.7 69 71.0
Thhalv10001711m.g Eutrema salsugineum HOM05D007605 ORTHO05D009572 1.3e-18 95.9 69 73.9
EL10Ac3g06103 Beta vulgaris HOM05D007605 ORTHO05D009572 1.7e-18 95.5 61 75.4
AL4G42650 Arabidopsis lyrata HOM05D007605 ORTHO05D009572 2.2e-18 95.1 69 73.9
AT2G43780 Arabidopsis thaliana HOM05D007605 ORTHO05D009572 3.8e-18 94.4 69 72.5
Glyma.19G073500 Glycine max HOM05D007605 ORTHO05D009572 3.8e-18 94.4 69 71.0
MBI07_g11492_MAGBIO Magnolia biondii HOM05D007605 ORTHO05D009572 3.8e-18 94.4 53 86.8
AUR62002411 Chenopodium quinoa HOM05D007605 ORTHO05D009572 4.9e-18 94.0 58 74.1
Atru.chr12.2308 Acer truncatum HOM05D007605 ORTHO05D009572 6.4e-18 93.6 60 75.0
Gohir.D10G122400 Gossypium hirsutum HOM05D007605 ORTHO05D009572 6.4e-18 93.6 59 83.1
Gorai.011G134700 Gossypium raimondii HOM05D007605 ORTHO05D009572 6.4e-18 93.6 59 83.1
BcaB01g03362 Brassica carinata HOM05D007605 ORTHO05D009572 8.4e-18 93.2 69 71.0
Manes.05G136900 Manihot esculenta HOM05D007605 ORTHO05D009572 8.4e-18 93.2 60 75.0
Manes.08G010900 Manihot esculenta HOM05D007605 ORTHO05D009572 8.4e-18 93.2 60 75.0
ECA248G2718 Erigeron canadensis HOM05D007605 ORTHO05D009572 1.1e-17 92.8 52 82.7
Os12g0611700 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 1.1e-17 92.8 60 76.7
Aa31LG1G25490 Aethionema arabicum HOM05D005323 ORTHO05D006820 1.4e-17 92.4 55 81.8
BcaC01g05214 Brassica carinata HOM05D007605 ORTHO05D009572 1.9e-17 92.0 69 68.1
C03p29150 Brassica napus HOM05D007605 ORTHO05D009572 1.9e-17 92.0 69 68.1
BolC3t15267H Brassica oleracea HOM05D007605 ORTHO05D009572 1.9e-17 92.0 69 68.1
Os05g0103800 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 2.4e-17 91.7 60 75.0
ATR0743G065 Amborella trichopoda HOM05D007605 ORTHO05D009572 3.2e-17 91.3 63 68.3
CARHR138960 Cardamine hirsuta HOM05D007605 ORTHO05D009572 3.2e-17 91.3 69 69.6
Lalb_Chr04g0257371 Lupinus albus HOM05D007605 ORTHO05D009572 3.2e-17 91.3 57 78.9
A03p24460 Brassica napus HOM05D007605 ORTHO05D009572 4.2e-17 90.9 69 68.1
Lsat_1_v5_gn_1_21060 Lactuca sativa HOM05D007605 ORTHO05D009572 5.4e-17 90.5 54 77.8
BraA03t11655Z Brassica rapa HOM05D007605 ORTHO05D009572 1.2e-16 89.4 69 66.7
BcaB05g23281 Brassica carinata HOM05D007605 ORTHO05D009572 1.6e-16 89.0 69 65.2
QL10p056550 Quercus lobata HOM05D007605 ORTHO05D009572 2.1e-16 88.6 65 72.3
BcaC02g12364 Brassica carinata HOM05D005323 ORTHO05D006820 3.5e-16 87.8 55 76.4
C04p04730 Brassica napus HOM05D005323 ORTHO05D006820 3.5e-16 87.8 55 76.4
BolC4t22103H Brassica oleracea HOM05D005323 ORTHO05D006820 3.5e-16 87.8 55 76.4
Glyma.19G030600 Glycine max HOM05D007605 ORTHO05D009572 6.0e-16 87.0 69 68.1
PSO573G0041 Papaver somniferum HOM05D007605 ORTHO05D009572 6.0e-16 87.0 57 73.7
BcaB02g08902 Brassica carinata HOM05D005323 ORTHO05D006820 7.8e-16 86.7 64 68.8
A05p03980 Brassica napus HOM05D005323 ORTHO05D006820 1.3e-15 85.9 62 69.4
BraA05t19386Z Brassica rapa HOM05D005323 ORTHO05D006820 1.7e-15 85.5 62 69.4
ClCG11G013540 Citrullus lanatus HOM05D007605 ORTHO05D009572 3.9e-15 84.3 50 82.0
CsaV3_5G030160 Cucumis sativus L. HOM05D007605 ORTHO05D009572 1.9e-14 82.0 47 85.1
GSVIVG01038176001 Vitis vinifera HOM05D007605 ORTHO05D009572 3.3e-14 81.3 59 67.8
Lsat_1_v5_gn_1_74540 Lactuca sativa HOM05D007605 ORTHO05D009572 1.3e-13 79.3 49 73.5
vmacro23387 Vaccinium macrocarpon HOM05D007605 ORTHO05D009572 1.6e-13 79.0 47 85.1
Lj6C218G0 Lonicera japonica HOM05D000384 ORTHO05D000468 1.1e-12 76.3 42 85.7
Glyma.17G205632 Glycine max HOM05D007605 ORTHO05D009572 2.4e-12 75.1 63 61.9
Mapoly0044s0040 Marchantia polymorpha HOM05D007605 ORTHO05D009572 1.9e-09 65.5 66 54.5
BcaC05g29066 Brassica carinata HOM05D007605 ORTHO05D009572 7.1e-09 63.5 46 65.2
Pp3c9_12740 Physcomitrium patens HOM05D007605 ORTHO05D009572 4.6e-08 60.8 56 58.9


User provided reference genes

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