Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 1.1e-89 333.2 162 100.0
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 1.3e-85 319.7 162 95.7
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 9.6e-65 250.4 160 75.6
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 5.7e-49 198.0 158 58.9
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 5.7e-41 171.4 158 56.3
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 1.7e-29 133.3 107 63.6
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 5.0e-29 131.7 105 61.9
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 3.2e-28 129.0 116 57.8
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 2.1e-27 126.3 102 59.8
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 1.8e-26 123.2 116 56.0
AUR62042045 Chenopodium quinoa HOM05D012386 ORTHO05D002688 8.8e-18 94.4 101 47.5
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 8.8e-18 94.4 116 44.0
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 8.8e-18 94.4 116 43.1
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 3.4e-17 92.4 107 43.0
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 9.8e-17 90.9 107 42.1
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 6.3e-16 88.2 100 42.0
Thecc.04G224300 Theobroma cacao HOM05D012386 ORTHO05D002688 3.1e-15 85.9 100 49.0
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 7.0e-15 84.7 101 45.5
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 7.0e-15 84.7 102 39.2
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.2e-14 84.0 104 43.3
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-14 82.8 96 43.8
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.5e-14 82.0 106 38.7
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 1.3e-13 80.5 101 44.6
Sabra05G0195900 Salix brachista HOM05D012386 ORTHO05D002688 2.2e-13 79.7 74 55.4
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 5.5e-12 75.1 99 41.4
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 1.6e-11 73.6 99 40.4
AUR62044079 Chenopodium quinoa HOM05D012386 ORTHO05D002688 2.7e-11 72.8 107 36.4
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 6.1e-11 71.6 110 37.3
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 8.0e-11 71.2 102 35.3
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.0e-10 70.9 99 38.4
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-10 70.9 83 42.2
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.4e-10 70.5 110 36.4
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 1.4e-10 70.5 126 34.1
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-10 70.1 114 35.1
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 6.8e-10 68.2 108 34.3
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.5e-09 67.0 107 35.5
Hma1.2p1_0317F.1_g123430 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-09 66.6 79 39.2
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 2.0e-09 66.6 127 33.9
Lsat_1_v5_gn_5_85721 Lactuca sativa HOM05D000039 ORTHO05D000870 2.6e-09 66.2 106 37.7
ECA233G5926 Erigeron canadensis HOM05D012386 ORTHO05D002688 4.4e-09 65.5 97 39.2
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 5.7e-09 65.1 69 47.8
COL.COLO4_28891 Corchorus olitorius HOM05D021688 ORTHO05D022442 1.3e-08 63.9 111 36.0
Hma1.2p1_0609F.1_g188530 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-08 63.5 72 44.4
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 3.7e-08 62.4 107 34.6
Gorai.009G186900 Gossypium raimondii HOM05D005504 ORTHO05D002688 4.9e-08 62.0 82 48.8
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-07 60.8 70 35.7
CSS0049663 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.4e-07 60.5 102 34.3
CSS0015173 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.8e-07 60.1 102 34.3
EL10Ac5g12237 Beta vulgaris HOM05D005504 ORTHO05D002688 2.4e-07 59.7 82 32.9
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 2.4e-07 59.7 99 34.3
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 3.1e-07 59.3 112 34.8
TWI09G1336 Tripterygium wilfordii HOM05D012386 ORTHO05D002688 3.1e-07 59.3 88 43.2
COL.COLO4_32183 Corchorus olitorius HOM05D021688 ORTHO05D022442 4.1e-07 58.9 100 38.0
Lsat_1_v5_gn_9_108520 Lactuca sativa HOM05D056539 ORTHO05D002688 5.4e-07 58.5 79 39.2
Lsat_1_v5_gn_9_18201 Lactuca sativa HOM05D056539 ORTHO05D002688 7.0e-07 58.2 79 39.2
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 9.2e-07 57.8 103 33.0
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 9.2e-07 57.8 76 40.8
Medtr3g027145 Medicago truncatula HOM05D005504 ORTHO05D002688 1.2e-06 57.4 108 37.0
Medtr5g086750 Medicago truncatula HOM05D005504 ORTHO05D002688 1.2e-06 57.4 108 37.0
Medtr7g094380 Medicago truncatula HOM05D005504 ORTHO05D002688 1.2e-06 57.4 108 37.0
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.6e-06 57.0 105 33.3
Ah.05g174390 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.0e-06 56.6 83 37.3
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 2.0e-06 56.6 65 41.5
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-06 56.6 65 41.5
EL10Ac4g08855 Beta vulgaris HOM05D012386 ORTHO05D002688 3.5e-06 55.8 74 40.5
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 7.7e-06 54.7 65 41.5
arahy.Tifrunner.gnm1.ann1.W93U0I Arachis hypogaea HOM05D000034 ORTHO05D002688 7.7e-06 54.7 70 34.3


User provided reference genes

Program Settings