Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 1.3e-71 273.1 150 100.0
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.1e-45 186.0 152 74.3
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 2.4e-33 146.0 148 56.8
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 7.1e-30 134.4 156 54.5
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.1e-29 132.9 151 56.3
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 1.9e-27 126.3 176 52.3
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 4.3e-27 125.2 142 55.6
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 4.3e-27 125.2 142 55.6
Haze_01214 Corylus avellana HOM05D006719 ORTHO05D007063 7.4e-27 124.4 83 88.0
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 2.4e-25 119.4 142 53.5
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 9.0e-25 117.5 150 52.7
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 2.9e-23 112.5 150 51.3
AUR62040366 Chenopodium quinoa HOM05D006719 ORTHO05D007063 8.4e-23 110.9 147 54.4
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.5e-22 109.4 132 53.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 5.5e-22 108.2 153 50.3
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 1.2e-21 107.1 119 53.8
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 1.2e-21 107.1 119 53.8
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.6e-21 106.7 138 51.4
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.1e-21 106.3 151 51.0
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 2.1e-21 106.3 151 51.0
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.1e-21 106.3 151 51.0
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 2.7e-21 105.9 150 50.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 3.5e-21 105.5 150 48.7
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 6.0e-21 104.8 150 49.3
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 7.9e-21 104.4 139 49.6
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 5.1e-20 101.7 147 49.0
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.1e-20 101.7 109 55.0
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 8.7e-20 100.9 148 50.7
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 8.7e-20 100.9 144 48.6
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 1.1e-19 100.5 134 50.0
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.5e-19 99.4 146 46.6
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 2.5e-19 99.4 148 48.6
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 5.7e-19 98.2 130 50.8
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 5.7e-19 98.2 135 48.1
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 7.4e-19 97.8 107 54.2
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 9.7e-19 97.4 150 46.0
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 9.7e-19 97.4 132 51.5
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 9.7e-19 97.4 141 48.9
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.3e-18 97.1 109 54.1
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.3e-18 97.1 145 47.6
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 3.7e-18 95.5 171 41.5
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 8.2e-18 94.4 141 46.1
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 8.2e-18 94.4 110 53.6
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.1e-17 94.0 148 44.6
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.8e-17 93.2 107 52.3
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.3e-17 91.7 146 44.5
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 9.0e-17 90.9 154 44.8
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.2e-16 90.5 130 46.9
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.6e-16 89.4 175 41.1
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.6e-16 89.4 142 45.8
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 3.4e-16 89.0 134 46.3
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 4.5e-16 88.6 135 48.1
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 7.6e-16 87.8 129 45.7
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 1.0e-15 87.4 142 44.4
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 2.2e-15 86.3 124 48.4
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.9e-15 85.9 145 45.5
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 2.9e-15 85.9 139 44.6
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.9e-15 85.9 126 46.0
Cc03_g02020 Coffea canephora HOM05D006719 ORTHO05D007063 1.1e-14 84.0 78 61.5
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.9e-14 83.2 147 44.9
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 3.2e-14 82.4 93 53.8
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 3.2e-14 82.4 152 44.7
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 3.2e-14 82.4 148 45.9
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.6e-13 80.1 137 40.9
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 2.1e-13 79.7 148 41.9
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.6e-13 78.6 146 39.7
Pp3c22_17550 Physcomitrium patens HOM05D039838 ORTHO05D007063 4.6e-13 78.6 109 44.0
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 7.9e-13 77.8 139 42.4
AUR62041205 Chenopodium quinoa HOM05D006719 ORTHO05D007063 1.8e-12 76.6 50 84.0
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 1.8e-12 76.6 131 37.4
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 3.0e-12 75.9 143 42.0
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 3.0e-12 75.9 150 41.3
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 5.1e-12 75.1 123 39.8
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 8.8e-12 74.3 146 40.4
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 8.8e-12 74.3 141 39.0
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 1.5e-11 73.6 165 38.8
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 1.9e-11 73.2 161 35.4
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.5e-11 72.8 150 40.7
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 1.7e-10 70.1 143 41.3
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 2.8e-10 69.3 136 41.2
CDE05G3651 Ceratophyllum demersum HOM05D006719 ORTHO05D007063 3.7e-10 68.9 77 46.8
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.3e-10 68.2 149 36.2
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.1e-09 67.4 65 63.1
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.4e-09 67.0 150 37.3
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 1.8e-09 66.6 108 41.7
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 2.4e-09 66.2 143 38.5
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 2.4e-09 66.2 143 39.9
ATR0706G169 Amborella trichopoda HOM05D006719 ORTHO05D007063 3.1e-09 65.9 46 78.3
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 4.1e-09 65.5 146 37.0
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 5.3e-09 65.1 149 36.2
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.3e-09 65.1 124 39.5
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 5.3e-09 65.1 145 39.3
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 1.2e-08 63.9 141 40.4
CDE02G4366 Ceratophyllum demersum HOM05D065966 ORTHO05D007063 2.0e-08 63.2 121 36.4
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 5.9e-08 61.6 120 40.8
SHI02083 Sapria himalayana HOM05D006719 ORTHO05D007063 5.9e-08 61.6 81 49.4
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 7.7e-08 61.2 156 36.5
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 7.7e-08 61.2 179 35.2
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 7.7e-08 61.2 149 37.6
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 7.7e-08 61.2 148 37.2
Os07g0671100 Oryza sativa ssp. japonica HOM05D065307 ORTHO05D007063 1.0e-07 60.8 80 45.0
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 1.0e-07 60.8 136 40.4
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 1.3e-07 60.5 141 35.5
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 1.3e-07 60.5 143 37.8
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.8e-07 58.9 149 34.9
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 3.8e-07 58.9 146 34.2
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 8.5e-07 57.8 152 36.8
Zm00001eb111130 Zea mays HOM05D065307 ORTHO05D007063 1.9e-06 56.6 94 39.4
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 2.5e-06 56.2 146 35.6
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 3.2e-06 55.8 148 35.1
Ah.13g074890 Amaranthus hybridus HOM05D006719 ORTHO05D007063 3.2e-06 55.8 110 36.4
Aqoxy5G00712 Aquilegia oxysepala HOM05D006719 ORTHO05D007063 3.2e-06 55.8 120 35.0
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 3.2e-06 55.8 132 37.9
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 9.4e-06 54.3 50 58.0


User provided reference genes

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