Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015298 Carpinus fangiana HOM05D000119 ORTHO05D122279 1.5e-32 142.1 67 100.0
Haze_17573 Corylus avellana HOM05D000119 ORTHO05D000054 1.6e-26 122.1 67 88.1
Cfa018503 Carpinus fangiana HOM05D000119 ORTHO05D000054 8.1e-26 119.8 67 86.6
Cfa015805 Carpinus fangiana HOM05D000119 ORTHO05D000054 6.0e-21 103.6 68 75.0
Potri.014G035100 Populus trichocarpa HOM05D000119 ORTHO05D000054 2.4e-14 81.6 69 65.2
QL02p006138 Quercus lobata HOM05D000119 ORTHO05D000054 1.6e-13 79.0 68 58.8
CiPaw.15G063900 Carya illinoinensis HOM05D000119 ORTHO05D000054 4.6e-13 77.4 69 60.9
Sabra14G0025000 Salix brachista HOM05D000119 ORTHO05D000054 6.0e-13 77.0 70 62.9
ClCG08G015600 Citrullus lanatus HOM05D000119 ORTHO05D000054 1.8e-12 75.5 63 61.9
Ca_15962_v3 Cicer arietinum L. HOM05D000119 ORTHO05D000054 8.7e-12 73.2 66 60.6
Ca_15971_v3 Cicer arietinum L. HOM05D000119 ORTHO05D000054 8.7e-12 73.2 66 60.6
ClCG05G019570 Citrullus lanatus HOM05D000119 ORTHO05D000054 8.7e-12 73.2 62 58.1
MELO3C010893.2 Cucumis melo HOM05D000119 ORTHO05D000054 8.7e-12 73.2 63 61.9
Sed0001759 Sechium edule HOM05D000119 ORTHO05D000054 1.9e-11 72.0 63 57.1
CsaV3_2G028170 Cucumis sativus L. HOM05D000119 ORTHO05D000054 2.5e-11 71.6 63 60.3
Sabra02G0101000 Salix brachista HOM05D000119 ORTHO05D000054 3.3e-11 71.2 61 62.3
Phvul.009G062700 Phaseolus vulgaris HOM05D000119 ORTHO05D000054 7.4e-11 70.1 67 58.2
Ciclev10002239m.g Citrus clementina HOM05D000119 ORTHO05D000054 2.1e-10 68.6 71 57.7
Potri.002G128900 Populus trichocarpa HOM05D000119 ORTHO05D000054 2.1e-10 68.6 59 61.0
Glyma.06G036800 Glycine max HOM05D000119 ORTHO05D000054 2.8e-10 68.2 66 59.1
Medtr3g101290 Medicago truncatula HOM05D000119 ORTHO05D000054 2.8e-10 68.2 67 55.2
TWI56G0089 Tripterygium wilfordii HOM05D000119 ORTHO05D000054 4.8e-10 67.4 64 59.4
Gohir.D05G203000 Gossypium hirsutum HOM05D000119 ORTHO05D000054 8.2e-10 66.6 67 55.2
Gorai.009G208900 Gossypium raimondii HOM05D000119 ORTHO05D000054 8.2e-10 66.6 67 55.2
Sed0016441 Sechium edule HOM05D000119 ORTHO05D000054 1.4e-09 65.9 64 57.8
Lalb_Chr11g0062501 Lupinus albus HOM05D000119 ORTHO05D000054 2.4e-09 65.1 61 55.7
VMungo1309G2359 Vigna mungo HOM05D000119 ORTHO05D000054 2.4e-09 65.1 70 54.3
MD15G1088000 Malus domestica HOM05D000119 ORTHO05D000054 3.1e-09 64.7 66 59.1
Sed0015866 Sechium edule HOM05D000119 ORTHO05D000054 3.1e-09 64.7 65 53.8
TAR381G0877 Trochodendron aralioides HOM05D000119 ORTHO05D000054 3.1e-09 64.7 63 54.0
Gohir.A05G199916 Gossypium hirsutum HOM05D000119 ORTHO05D000054 4.0e-09 64.3 67 53.7
Psat5g044720 Pisum sativum HOM05D000119 ORTHO05D000054 4.0e-09 64.3 72 51.4
CsaV3_4G034040 Cucumis sativus L. HOM05D000119 ORTHO05D000054 5.3e-09 63.9 60 55.0
MELO3C032396.2 Cucumis melo HOM05D000119 ORTHO05D000054 6.9e-09 63.5 64 51.6
CANSAT25G1606 Cannabis sativa HOM05D000119 ORTHO05D000054 1.5e-08 62.4 63 54.0
PGR031G2174 Punica granatum HOM05D000119 ORTHO05D000054 1.5e-08 62.4 70 52.9
Thecc.08G014300 Theobroma cacao HOM05D000119 ORTHO05D000054 1.5e-08 62.4 66 53.0
TPR.G26075 Trifolium pratense HOM05D000119 ORTHO05D000054 1.5e-08 62.4 76 50.0
Atru.chr13.621 Acer truncatum HOM05D000119 ORTHO05D000054 2.0e-08 62.0 59 59.3
Duzib093G0754 Durio zibethinus HOM05D000119 ORTHO05D000054 2.0e-08 62.0 64 51.6
COL.COLO4_26450 Corchorus olitorius HOM05D000119 ORTHO05D000054 2.6e-08 61.6 68 54.4
Glyma.17G245200 Glycine max HOM05D000119 ORTHO05D000054 2.6e-08 61.6 59 57.6
MD08G1107400 Malus domestica HOM05D000119 ORTHO05D000054 2.6e-08 61.6 68 50.0
Lsat_1_v5_gn_1_19840 Lactuca sativa HOM05D000119 ORTHO05D000054 3.4e-08 61.2 62 53.2
Duzib116G0888 Durio zibethinus HOM05D000119 ORTHO05D000054 4.5e-08 60.8 69 53.6
Lalb_Chr23g0266931 Lupinus albus HOM05D000119 ORTHO05D000054 4.5e-08 60.8 60 51.7
Manes.18G034822 Manihot esculenta HOM05D000119 ORTHO05D000054 5.8e-08 60.5 74 45.9
CAN.G371.52 Capsicum annuum HOM05D000119 ORTHO05D000054 1.0e-07 59.7 61 49.2
Nitab4.5_0008039g0010 Nicotiana tabacum HOM05D000119 ORTHO05D000054 1.0e-07 59.7 55 52.7
Rhsim06G0046000 Rhododendron simsii HOM05D000119 ORTHO05D000054 1.3e-07 59.3 73 46.6
CSS0041456 Camellia sinensis var. sinensis HOM05D000119 ORTHO05D000054 1.7e-07 58.9 67 49.3
Glyma.04G036700 Glycine max HOM05D000119 ORTHO05D000054 1.7e-07 58.9 62 54.8
Prupe.1G441700 Prunus persica HOM05D000119 ORTHO05D000054 1.7e-07 58.9 69 52.2
PGSC0003DMG400007994 Solanum tuberosum HOM05D000119 ORTHO05D000054 1.7e-07 58.9 59 52.5
FAN20G1471 Fragaria x ananassa HOM05D000119 ORTHO05D000054 2.2e-07 58.5 73 46.6
FAN27G0172 Fragaria x ananassa HOM05D000119 ORTHO05D000054 2.2e-07 58.5 73 46.6
Solyc04g079360.1 Solanum lycopersicum HOM05D000119 ORTHO05D000054 2.2e-07 58.5 59 52.5
Sopen04g032970 Solanum pennellii HOM05D000119 ORTHO05D000054 2.2e-07 58.5 59 52.5
Manes.05G170200 Manihot esculenta HOM05D000119 ORTHO05D000054 4.9e-07 57.4 61 52.5
FvH4_2g35010 Fragaria vesca HOM05D000119 ORTHO05D000054 6.5e-07 57.0 74 47.3
Lalb_Chr08g0245681 Lupinus albus HOM05D000119 ORTHO05D000054 6.5e-07 57.0 56 55.4
MSTRG.1328 Avicennia marina HOM05D000119 ORTHO05D000054 8.4e-07 56.6 59 52.5
Cc10_g03870 Coffea canephora HOM05D000119 ORTHO05D000054 1.1e-06 56.2 65 52.3
FAN15G1363 Fragaria x ananassa HOM05D000119 ORTHO05D000054 1.1e-06 56.2 74 47.3
HanXRQChr09g0268111 Helianthus annuus HOM05D000119 ORTHO05D000054 1.1e-06 56.2 67 49.3
ECA232G2242 Erigeron canadensis HOM05D000119 ORTHO05D000054 1.4e-06 55.8 59 44.1
RcHm_v2.0_Chr6g0307001 Rosa chinensis HOM05D000119 ORTHO05D000054 1.4e-06 55.8 75 45.3
Dinv35996 Davidia involucrata HOM05D000119 ORTHO05D000054 1.9e-06 55.5 63 49.2
DCAR_019472 Daucus carota HOM05D000119 ORTHO05D000054 2.5e-06 55.1 68 47.1
Duzib041G0794 Durio zibethinus HOM05D000119 ORTHO05D000054 2.5e-06 55.1 54 51.9
Lj1g0003783 Lotus japonicus HOM05D000119 ORTHO05D000054 2.5e-06 55.1 35 68.6
Oeu006157.1 Olea europaea HOM05D000119 ORTHO05D000054 3.2e-06 54.7 63 52.4
Migut.C00610 Erythranthe guttata HOM05D000119 ORTHO05D000054 4.2e-06 54.3 57 59.6
Nitab4.5_0000068g0400 Nicotiana tabacum HOM05D000119 ORTHO05D000054 5.5e-06 53.9 55 52.7
Peaxi162Scf00566g00051 Petunia axillaris HOM05D000119 ORTHO05D000054 5.5e-06 53.9 55 52.7
HanXRQChr02g0046621 Helianthus annuus HOM05D000119 ORTHO05D000054 7.1e-06 53.5 65 44.6
TAR625G1135 Trochodendron aralioides HOM05D000119 ORTHO05D000054 7.1e-06 53.5 58 48.3


User provided reference genes

Program Settings