Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015292 Carpinus fangiana HOM05D007925 ORTHO05D009727 8.4e-104 380.6 222 100.0
Haze_01318 Corylus avellana HOM05D007925 ORTHO05D009727 2.6e-81 305.8 222 79.3
Haze_01320 Corylus avellana HOM05D007925 ORTHO05D009727 4.4e-76 288.5 280 63.6
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 6.3e-59 231.5 222 62.6
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 1.8e-45 186.8 225 52.0
Dinv44272 Davidia involucrata HOM05D007925 ORTHO05D009727 4.6e-41 172.2 226 51.8
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 9.2e-34 147.9 225 46.7
RcHm_v2.0_Chr4g0425771 Rosa chinensis HOM05D007925 ORTHO05D009727 3.9e-32 142.5 230 43.0
Gohir.A02G055200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 1.6e-30 137.1 186 49.5
Gorai.005G067800 Gossypium raimondii HOM05D007925 ORTHO05D009727 2.3e-29 133.3 186 47.8
Gohir.D02G060200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 5.2e-29 132.1 186 47.3
FvH4_4g20280 Fragaria vesca HOM05D007925 ORTHO05D009727 8.9e-29 131.3 224 42.0
Thecc.04G303500 Theobroma cacao HOM05D007925 ORTHO05D009727 1.2e-28 131.0 186 48.4
Ciclev10005876m.g Citrus clementina HOM05D007925 ORTHO05D009727 7.6e-28 128.3 228 40.4
Prupe.1G115200 Prunus persica HOM05D007925 ORTHO05D009727 7.6e-28 128.3 227 42.7
Actinidia18460 Actinidia chinensis HOM05D007925 ORTHO05D009727 9.9e-28 127.9 222 42.3
FvH4_4g20350 Fragaria vesca HOM05D007925 ORTHO05D009727 1.3e-27 127.5 223 43.5
Manes.15G001100 Manihot esculenta HOM05D007925 ORTHO05D009727 4.9e-27 125.6 216 40.7
Potri.012G102300 Populus trichocarpa HOM05D007925 ORTHO05D009727 8.4e-27 124.8 229 39.7
ClCG06G004510 Citrullus lanatus HOM05D007925 ORTHO05D009727 1.1e-26 124.4 228 40.4
TWI09G1395 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 1.2e-25 120.9 223 39.9
TAR633G0906 Trochodendron aralioides HOM05D007925 ORTHO05D009727 4.6e-25 119.0 205 42.9
Sed0014435 Sechium edule HOM05D007925 ORTHO05D009727 6.6e-24 115.2 226 38.9
Phvul.006G118800 Phaseolus vulgaris HOM05D007925 ORTHO05D009727 1.1e-23 114.4 227 39.6
COL.COLO4_34592 Corchorus olitorius HOM05D007925 ORTHO05D009727 3.3e-23 112.8 183 44.8
TWI53G0957 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 1.6e-22 110.5 223 35.9
CsaV3_6G028540 Cucumis sativus L. HOM05D007925 ORTHO05D009727 2.1e-22 110.2 227 35.7
Nn4g25550 Nelumbo nucifera HOM05D007925 ORTHO05D009727 3.1e-21 106.3 219 38.4
FvH4_4g20060 Fragaria vesca HOM05D007925 ORTHO05D009727 8.9e-21 104.8 170 45.9
Rhsim04G0240400 Rhododendron simsii HOM05D007925 ORTHO05D009727 3.4e-20 102.8 231 39.0
Glyma.09G034600 Glycine max HOM05D007925 ORTHO05D009727 7.6e-20 101.7 213 39.4
MELO3C021261.2 Cucumis melo HOM05D007925 ORTHO05D009727 2.2e-19 100.1 201 37.8
FAN07G0172 Fragaria x ananassa HOM05D007925 ORTHO05D009727 3.8e-19 99.4 140 43.6
AUR62039262 Chenopodium quinoa HOM05D007925 ORTHO05D009727 5.4e-18 95.5 217 40.6
FAN12G1072 Fragaria x ananassa HOM05D007925 ORTHO05D009727 7.1e-18 95.1 223 36.3
Ah.13g071370 Amaranthus hybridus HOM05D007925 ORTHO05D009727 2.7e-17 93.2 202 37.1
VMungo0540G0187 Vigna mungo HOM05D007925 ORTHO05D009727 4.6e-17 92.4 232 37.5
Potri.008G103600 Populus trichocarpa HOM05D007925 ORTHO05D009727 1.0e-16 91.3 206 40.8
Sopen03g024830 Solanum pennellii HOM05D007925 ORTHO05D009727 5.1e-16 89.0 236 35.6
AUR62016227 Chenopodium quinoa HOM05D007925 ORTHO05D009727 6.6e-16 88.6 182 44.0
Glyma.15G139300 Glycine max HOM05D007925 ORTHO05D009727 1.1e-15 87.8 212 38.2
Oeu063653.1 Olea europaea HOM05D007925 ORTHO05D009727 3.3e-15 86.3 234 35.5
PGSC0003DMG400008341 Solanum tuberosum HOM05D007925 ORTHO05D009727 3.3e-15 86.3 202 34.2
Migut.B00760 Erythranthe guttata HOM05D007925 ORTHO05D009727 7.3e-15 85.1 231 35.9
MD16G1151500 Malus domestica HOM05D007925 ORTHO05D009727 1.6e-14 84.0 148 40.5
Solyc03g093980.2 Solanum lycopersicum HOM05D007925 ORTHO05D009727 1.6e-14 84.0 236 35.2
Sabra12G0074900 Salix brachista HOM05D007925 ORTHO05D009727 2.1e-14 83.6 227 31.7
Nitab4.5_0007718g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 2.8e-14 83.2 235 32.8
Nitab4.5_0009429g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 8.1e-14 81.6 236 34.3
arahy.Tifrunner.gnm1.ann1.BW1DTW Arachis hypogaea HOM05D007925 ORTHO05D009727 6.9e-13 78.6 181 33.7
MD13G1151000 Malus domestica HOM05D007925 ORTHO05D009727 3.4e-12 76.3 153 35.3
arahy.Tifrunner.gnm1.ann1.8N1160 Arachis hypogaea HOM05D007925 ORTHO05D009727 4.5e-12 75.9 181 33.1
Eucgr.H04059 Eucalyptus grandis HOM05D007925 ORTHO05D009727 5.8e-12 75.5 174 33.3
SalBow8G2554 Salvia bowleyana HOM05D007925 ORTHO05D009727 7.6e-12 75.1 190 38.9
Oeu042669.1 Olea europaea HOM05D007925 ORTHO05D009727 9.9e-12 74.7 201 37.8
SHI00122 Sapria himalayana HOM05D007925 ORTHO05D009727 6.4e-11 72.0 89 46.1
Potri.010G147301 Populus trichocarpa HOM05D007925 ORTHO05D009727 1.4e-10 70.9 160 36.9
Sc13g0006560 Simmondsia chinensis HOM05D007925 ORTHO05D009727 7.1e-10 68.6 97 38.1
CANSAT35G1711 Cannabis sativa HOM05D007925 ORTHO05D009727 1.6e-09 67.4 168 35.7
ECA233G1514 Erigeron canadensis HOM05D007925 ORTHO05D009727 6.0e-09 65.5 274 29.6
Peaxi162Scf00935g00005 Petunia axillaris HOM05D007925 ORTHO05D009727 6.0e-09 65.5 145 33.1
Manes.03G206101 Manihot esculenta HOM05D007925 ORTHO05D009727 7.9e-09 65.1 181 33.7
Lsat_1_v5_gn_6_39741 Lactuca sativa HOM05D007925 ORTHO05D009727 2.3e-08 63.5 199 31.2
Lj6g0027570 Lotus japonicus HOM05D007925 ORTHO05D009727 3.9e-08 62.8 234 34.2
Peaxi162Scf00935g00006 Petunia axillaris HOM05D007925 ORTHO05D009727 3.3e-07 59.7 155 36.1
Migut.B00759 Erythranthe guttata HOM05D007925 ORTHO05D009727 5.6e-07 58.9 233 34.3
MBI18_g22338_MAGBIO Magnolia biondii HOM05D020265 ORTHO05D009727 2.8e-06 56.6 138 33.3
Medtr2g033900 Medicago truncatula HOM05D007925 ORTHO05D009727 3.6e-06 56.2 170 35.3


User provided reference genes

Program Settings