Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 3.3e-104 382.1 255 100.0
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 8.0e-98 360.9 255 95.7
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 6.7e-97 357.8 255 95.3
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 5.2e-57 225.3 256 71.1
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 1.3e-52 210.7 238 71.8
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 1.2e-48 197.6 255 63.5
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.4e-46 190.7 256 65.2
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 2.3e-44 183.3 253 60.5
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 3.0e-44 183.0 255 61.6
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 4.3e-43 179.1 255 58.8
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.2e-42 177.6 253 58.5
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 2.8e-42 176.4 253 58.9
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 1.1e-41 174.5 253 58.5
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 5.6e-35 152.1 257 59.9
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 9.0e-33 144.8 254 59.8
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.0e-32 143.7 257 56.0
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 2.6e-32 143.3 256 57.4
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 7.6e-32 141.7 253 56.5
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 8.4e-31 138.3 244 56.1
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.1e-30 137.9 244 59.4
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.4e-30 137.5 236 60.2
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 2.7e-29 133.3 257 49.8
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 6.0e-29 132.1 262 54.6
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 6.0e-29 132.1 244 56.6
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 6.6e-28 128.6 257 53.3
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.5e-27 127.5 241 55.6
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 4.3e-27 125.9 233 57.9
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 1.3e-26 124.4 261 53.3
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 1.6e-26 124.0 253 55.3
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 4.8e-26 122.5 224 60.3
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 4.8e-26 122.5 249 56.2
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 6.2e-26 122.1 251 56.2
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 9.0e-25 118.2 253 55.3
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 7.6e-24 115.2 185 64.9
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.3e-23 114.4 256 48.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 1.7e-23 114.0 261 37.2
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 6.4e-23 112.1 229 54.1
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 6.4e-23 112.1 249 53.8
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 6.4e-23 112.1 286 47.2
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 6.4e-23 112.1 253 51.8
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 1.1e-22 111.3 256 52.7
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 4.2e-22 109.4 256 53.1
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 5.4e-22 109.0 230 56.5
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 2.1e-21 107.1 256 50.0
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 4.6e-21 105.9 256 53.5
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 3.9e-20 102.8 256 51.6
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 2.5e-19 100.1 246 50.8
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 7.4e-19 98.6 251 51.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 1.6e-18 97.4 262 51.9
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 6.2e-18 95.5 255 51.8
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 6.2e-18 95.5 255 51.8
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 1.1e-17 94.7 249 51.0
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.1e-17 94.7 198 57.6
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.1e-17 94.7 251 51.0
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.4e-17 94.4 263 47.9
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 3.1e-17 93.2 255 53.3
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 4.0e-17 92.8 185 63.8
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 4.0e-17 92.8 253 50.6
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 5.3e-17 92.4 237 53.2
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 1.2e-16 91.3 257 47.9
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.2e-16 91.3 251 41.0
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 2.0e-16 90.5 241 44.8
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 4.5e-16 89.4 258 35.3
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 1.3e-15 87.8 257 50.6
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 4.9e-15 85.9 236 51.7
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 4.9e-15 85.9 230 52.2
Lalb_Chr20g0120751 Lupinus albus HOM05D007634 ORTHO05D004310 8.4e-15 85.1 214 52.8
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 1.4e-14 84.3 256 49.2
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 1.9e-14 84.0 261 49.8
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 3.2e-14 83.2 228 52.2
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 3.2e-14 83.2 256 49.2
Psat4g021760 Pisum sativum HOM05D007634 ORTHO05D004310 4.2e-14 82.8 224 49.6
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 7.1e-14 82.0 252 48.8
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 7.1e-14 82.0 205 54.6
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 1.2e-13 81.3 205 54.6
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 2.7e-13 80.1 233 35.6
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 3.5e-13 79.7 245 47.3
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 7.9e-13 78.6 256 49.2
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 1.0e-12 78.2 238 50.4
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 1.3e-12 77.8 260 45.4
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 1.8e-12 77.4 224 50.0
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 1.8e-12 77.4 259 38.2
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.3e-12 77.0 256 46.1
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 3.9e-12 76.3 203 55.2
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 6.7e-12 75.5 97 45.4
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 6.7e-12 75.5 217 43.8
Nn4g25534 Nelumbo nucifera HOM05D009814 ORTHO05D004310 8.7e-12 75.1 228 52.6
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.9e-11 73.9 256 46.1
Sc17g0000300 Simmondsia chinensis HOM05D009814 ORTHO05D004310 2.5e-11 73.6 215 53.0
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 3.3e-11 73.2 239 46.9
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 3.3e-11 73.2 258 43.8
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 3.3e-11 73.2 216 34.3
DCAR_023359 Daucus carota HOM05D012194 ORTHO05D015569 4.3e-11 72.8 203 45.3
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 4.3e-11 72.8 95 51.6
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 5.7e-11 72.4 258 39.9
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 9.6e-11 71.6 255 45.1
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 9.6e-11 71.6 237 47.3
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 9.6e-11 71.6 95 50.5
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.6e-10 70.9 258 46.9
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 1.6e-10 70.9 115 45.2
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 2.8e-10 70.1 256 44.9
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 2.8e-10 70.1 258 39.5
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 3.7e-10 69.7 254 42.5
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 3.7e-10 69.7 256 45.3
ATR0693G086 Amborella trichopoda HOM05D007634 ORTHO05D004310 4.8e-10 69.3 211 44.5
PSO210G0186 Papaver somniferum HOM05D058645 ORTHO05D004310 4.8e-10 69.3 223 50.2
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 4.8e-10 69.3 256 41.0
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 8.2e-10 68.6 249 45.4
EL10Ac3g05537 Beta vulgaris HOM05D007634 ORTHO05D004310 1.8e-09 67.4 283 40.6
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 6.9e-09 65.5 238 30.7
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 1.2e-08 64.7 256 45.3
PSO761G0298 Papaver somniferum HOM05D058645 ORTHO05D004310 1.5e-08 64.3 223 49.8
Hund11988 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.5e-08 64.3 266 44.4
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 1.5e-08 64.3 203 43.3
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 2.0e-08 63.9 258 45.7
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 2.6e-08 63.5 257 45.9
Gohir.A10G174000 Gossypium hirsutum HOM05D032758 ORTHO05D004310 2.6e-08 63.5 216 48.1
vmacro15171 Vaccinium macrocarpon HOM05D018149 ORTHO05D020732 2.6e-08 63.5 105 43.8
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 3.4e-08 63.2 184 56.0
Aqoxy6G01340 Aquilegia oxysepala HOM05D009814 ORTHO05D004310 3.4e-08 63.2 107 41.1
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 3.4e-08 63.2 254 46.9
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 4.5e-08 62.8 258 45.7
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 4.5e-08 62.8 189 52.4
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 5.8e-08 62.4 250 44.8
Glyma.17G035900 Glycine max HOM05D007634 ORTHO05D004310 1.0e-07 61.6 113 39.8
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 1.3e-07 61.2 250 30.8
Gohir.D10G180500 Gossypium hirsutum HOM05D032758 ORTHO05D047072 1.7e-07 60.8 204 50.0
Sp3g15340 Schrenkiella parvula HOM05D009836 ORTHO05D012041 1.7e-07 60.8 96 37.5
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 1.7e-07 60.8 229 45.4
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 3.8e-07 59.7 206 42.2
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 3.8e-07 59.7 178 39.3
Gorai.006G265400 Gossypium raimondii HOM05D007634 ORTHO05D004310 5.0e-07 59.3 234 44.4
Gorai.011G202000 Gossypium raimondii HOM05D032758 ORTHO05D047072 5.0e-07 59.3 217 47.9
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 8.4e-07 58.5 246 42.7
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 1.1e-06 58.2 218 51.8
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 1.4e-06 57.8 196 48.0
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.4e-06 57.8 235 29.4
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 3.2e-06 56.6 254 26.4
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 4.2e-06 56.2 221 26.7
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 4.2e-06 56.2 215 41.9
Solyc05g053360.3 Solanum lycopersicum HOM05D012194 ORTHO05D015569 5.5e-06 55.8 246 43.1
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 7.2e-06 55.5 235 28.5
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 7.2e-06 55.5 220 28.6
Sopen05g031870 Solanum pennellii HOM05D012194 ORTHO05D015569 7.2e-06 55.5 246 43.1
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 9.3e-06 55.1 234 44.9
PGR004G0186 Punica granatum HOM05D007634 ORTHO05D004310 9.3e-06 55.1 92 41.3


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