Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.4e-33 144.4 73 100.0
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.7e-27 124.8 73 90.4
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 5.9e-14 80.5 72 65.3
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 6.6e-13 77.0 72 66.7
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-12 75.9 74 63.5
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-12 74.7 72 62.5
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 7.3e-12 73.6 74 62.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.1e-11 72.0 69 63.8
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.1e-11 72.0 69 63.8
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.6e-11 71.2 72 62.5
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 3.6e-11 71.2 74 60.8
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 4.7e-11 70.9 75 58.7
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.1e-11 70.5 69 60.9
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.8e-10 68.9 69 63.8
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.3e-10 68.6 71 63.4
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-10 67.8 71 57.7
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-10 67.8 71 60.6
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 8.9e-10 66.6 75 58.7
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-09 66.2 71 56.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.2e-09 66.2 74 55.4
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 75 58.7
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-09 65.5 71 57.7
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.6e-09 65.1 64 62.5
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 2.6e-09 65.1 75 58.7
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.4e-09 64.7 64 64.1
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 3.4e-09 64.7 69 59.4
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-09 64.7 67 47.8
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-09 64.7 67 47.8
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-09 64.3 71 57.7
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-09 64.3 72 61.1
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 5.8e-09 63.9 69 59.4
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 5.8e-09 63.9 68 47.1
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.5e-09 63.5 64 62.5
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.8e-09 63.2 77 57.1
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.8e-09 63.2 69 49.3
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 9.8e-09 63.2 75 57.3
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-08 62.8 75 57.3
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-08 62.8 68 45.6
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-08 62.0 74 52.7
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-08 62.0 77 57.1
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-08 62.0 77 57.1
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-08 61.6 72 59.7
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 3.7e-08 61.2 52 65.4
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.9e-08 60.8 69 56.5
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 4.9e-08 60.8 75 49.3
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.4e-08 60.5 67 55.2
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 6.4e-08 60.5 70 52.9
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 6.4e-08 60.5 69 50.7
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 8.3e-08 60.1 74 56.8
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.1e-07 59.7 76 50.0
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-07 59.7 68 54.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 56.5
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 56.5
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 52.2
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 2.4e-07 58.5 76 44.7
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 2.4e-07 58.5 69 49.3
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.2e-07 58.2 71 59.2
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.2e-07 58.2 72 58.3
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 3.2e-07 58.2 70 55.7
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 4.1e-07 57.8 75 49.3
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 4.1e-07 57.8 69 53.6
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 4.1e-07 57.8 68 52.9
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 4.1e-07 57.8 83 49.4
Ah.09g237750 Amaranthus hybridus HOM05D003433 ORTHO05D003921 5.4e-07 57.4 51 58.8
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.4e-07 57.4 74 50.0
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 5.4e-07 57.4 68 50.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 5.4e-07 57.4 69 47.8
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.2e-07 56.6 64 59.4
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.2e-07 56.6 67 53.7
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 9.2e-07 56.6 76 43.4
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 9.2e-07 56.6 69 55.1
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-06 55.8 76 46.1
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.6e-06 55.8 69 49.3
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-06 55.5 70 52.9
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.0e-06 55.5 76 47.4
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 2.7e-06 55.1 74 48.6
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 2.7e-06 55.1 76 46.1
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.6e-06 54.3 73 57.5
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-06 54.3 67 50.7
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 4.6e-06 54.3 68 51.5
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.0e-06 53.9 70 51.4
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.0e-06 53.9 74 50.0
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 7.8e-06 53.5 75 42.7
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 7.8e-06 53.5 69 49.3
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 7.8e-06 53.5 69 52.2


User provided reference genes

Program Settings