Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-35 151.4 74 100.0
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-30 134.8 74 89.2
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.6e-25 116.7 74 79.7
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-24 115.2 74 79.7
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.0e-22 107.1 74 73.0
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.8e-22 106.7 74 75.7
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-21 104.8 74 70.3
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.1e-21 104.0 74 71.6
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.7e-21 103.2 74 70.3
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-19 99.0 74 71.6
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-17 92.0 74 68.9
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.5e-17 90.9 76 71.1
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.5e-17 90.9 76 71.1
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.8e-17 90.5 77 68.8
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 5.8e-17 90.5 73 65.8
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.6e-17 90.1 81 63.0
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 9.9e-17 89.7 74 66.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.3e-16 89.4 75 68.0
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.3e-16 89.4 75 68.0
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-16 89.0 74 66.2
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-16 88.6 75 69.3
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.2e-16 88.6 75 62.7
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.8e-16 87.8 76 69.7
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.8e-16 87.8 75 65.3
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 6.4e-16 87.0 75 66.7
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 8.4e-16 86.7 74 63.5
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-15 86.3 70 65.7
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 2.4e-15 85.1 70 65.7
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-15 84.7 76 61.8
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.4e-15 84.0 80 68.8
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.4e-15 84.0 80 68.8
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 5.4e-15 84.0 80 62.5
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 5.4e-15 84.0 74 63.5
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.1e-15 83.6 80 68.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 7.1e-15 83.6 71 66.2
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 7.1e-15 83.6 74 63.5
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 9.3e-15 83.2 75 58.7
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 9.3e-15 83.2 74 62.2
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.2e-14 82.8 75 58.7
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.6e-14 82.4 78 64.1
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 2.1e-14 82.0 75 58.7
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 2.7e-14 81.6 75 62.7
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.5e-14 81.3 76 64.5
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 3.5e-14 81.3 71 62.0
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-14 80.9 72 66.7
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 4.6e-14 80.9 71 63.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 6.0e-14 80.5 75 61.3
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 6.0e-14 80.5 82 58.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 7.9e-14 80.1 74 52.7
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 7.9e-14 80.1 74 52.7
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-13 79.7 75 65.3
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 80 67.5
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-13 79.0 76 61.8
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-13 79.0 75 57.3
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.8e-13 79.0 76 61.8
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.3e-13 78.6 75 57.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.0e-13 78.2 78 59.0
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.0e-13 78.2 75 57.3
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 3.0e-13 78.2 71 62.0
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 3.9e-13 77.8 75 58.7
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.1e-13 77.4 76 61.8
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 5.1e-13 77.4 76 60.5
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.1e-13 77.4 76 60.5
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 5.1e-13 77.4 75 53.3
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 5.1e-13 77.4 74 62.2
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 8.7e-13 76.6 75 58.7
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 8.7e-13 76.6 80 60.0
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 8.7e-13 76.6 69 58.0
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.1e-12 76.3 81 55.6
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-12 76.3 70 60.0
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.9e-12 75.5 75 56.0
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.9e-12 75.5 76 55.3
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.3e-12 74.7 76 59.2
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.3e-12 74.7 76 59.2
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.3e-12 74.3 78 60.3
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.3e-12 74.3 75 50.7
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 4.3e-12 74.3 75 52.0
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 7.4e-12 73.6 71 57.7
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 7.4e-12 73.6 75 58.7
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 7.4e-12 73.6 76 57.9
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.3e-11 72.8 75 48.0
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-11 72.8 69 63.8
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.3e-11 72.8 76 57.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.6e-11 72.4 76 55.3
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-11 72.4 73 56.2
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.1e-11 72.0 70 62.9
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.8e-11 71.6 75 49.3
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.7e-11 71.2 76 56.6
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 4.8e-11 70.9 59 66.1
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-11 70.9 75 57.3
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 6.2e-11 70.5 76 55.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 6.2e-11 70.5 78 55.1
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.1e-11 70.1 71 63.4
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 8.1e-11 70.1 74 50.0
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 8.1e-11 70.1 69 60.9
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 8.1e-11 70.1 76 55.3
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.1e-10 69.7 76 53.9
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.1e-10 69.7 75 56.0
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-10 69.7 69 59.4
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 4.0e-10 67.8 76 51.3
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 6.9e-10 67.0 76 52.6
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 9.0e-10 66.6 69 47.8
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 1.2e-09 66.2 62 53.2
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-09 65.9 75 53.3
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.5e-09 65.9 75 49.3
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-09 64.3 77 59.7
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 5.8e-09 63.9 83 53.0
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 3.8e-08 61.2 61 59.0
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 4.9e-08 60.8 74 47.3
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 4.9e-08 60.8 82 52.4
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 8.4e-08 60.1 79 44.3
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 8.4e-08 60.1 82 43.9
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 1.1e-07 59.7 68 45.6
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 56.5
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-07 58.9 75 50.7
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.9e-07 58.9 79 45.6
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 2.5e-07 58.5 71 46.5
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 3.2e-07 58.2 77 45.5
AUR62002372 Chenopodium quinoa HOM05D020500 ORTHO05D021210 4.2e-07 57.8 72 41.7
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 4.2e-07 57.8 82 50.0
MELO3C027180.2 Cucumis melo HOM05D064062 ORTHO05D007460 1.2e-06 56.2 77 45.5
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 2.7e-06 55.1 79 41.8
AUR62002617 Chenopodium quinoa HOM05D020500 ORTHO05D021210 3.5e-06 54.7 72 40.3
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.6e-06 54.3 74 54.1
AUR62023815 Chenopodium quinoa HOM05D020500 ORTHO05D021210 7.9e-06 53.5 71 40.8
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.9e-06 53.5 54 53.7


User provided reference genes

Program Settings