Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.7e-33 142.9 73 100.0
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-26 121.3 73 84.9
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-25 117.5 73 82.2
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-23 112.5 74 79.7
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-23 112.1 73 80.8
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.0e-23 110.2 74 77.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-21 105.5 73 72.6
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.6e-21 103.2 73 69.9
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-20 102.8 73 72.6
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.3e-20 101.3 73 68.5
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-17 92.4 73 69.9
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 2.2e-16 88.6 74 67.6
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.7e-16 87.8 76 68.4
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.9e-16 87.4 74 66.2
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 4.9e-16 87.4 74 66.2
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 4.9e-16 87.4 72 65.3
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-15 86.3 71 70.4
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-15 86.3 71 70.4
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-15 86.3 73 65.8
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-15 85.9 71 70.4
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-15 85.9 74 63.5
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.4e-15 85.9 74 59.5
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-15 84.7 73 64.4
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-15 84.3 76 64.5
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 4.1e-15 84.3 74 58.1
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 5.4e-15 84.0 65 66.2
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 7.0e-15 83.6 73 63.0
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.2e-15 83.2 77 67.5
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.2e-14 82.8 77 62.3
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.2e-14 82.8 70 62.9
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-14 82.4 73 64.4
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-14 82.0 69 62.3
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.7e-14 81.6 74 58.1
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.7e-14 81.6 74 58.1
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.7e-14 81.6 74 58.1
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-14 80.9 71 67.6
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 4.6e-14 80.9 75 57.3
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 4.6e-14 80.9 75 60.0
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.6e-14 80.9 70 60.0
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.6e-14 80.9 74 56.8
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.9e-14 80.5 74 66.2
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 5.9e-14 80.5 74 55.4
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 5.9e-14 80.5 69 63.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 7.8e-14 80.1 70 60.0
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 7.8e-14 80.1 66 65.2
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 7.8e-14 80.1 70 61.4
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 7.8e-14 80.1 74 59.5
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.0e-13 79.7 74 55.4
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.3e-13 79.3 72 69.4
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.3e-13 79.3 74 55.4
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-13 79.3 69 63.8
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.7e-13 79.0 70 60.0
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-13 78.6 76 65.8
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-13 78.6 76 65.8
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-13 78.6 81 63.0
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 2.9e-13 78.2 75 56.0
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.9e-13 78.2 70 58.6
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-13 78.2 72 58.3
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 5.0e-13 77.4 80 57.5
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 6.6e-13 77.0 73 61.6
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.6e-13 76.6 76 65.8
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 8.6e-13 76.6 75 54.7
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-12 76.3 70 60.0
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-12 75.5 75 61.3
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-12 75.5 76 64.5
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 1.9e-12 75.5 75 54.7
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-12 75.1 76 64.5
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.5e-12 75.1 74 54.1
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 5.6e-12 73.9 77 54.5
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 9.5e-12 73.2 75 58.7
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-11 72.8 77 59.7
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-11 72.8 70 52.9
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.6e-11 72.4 59 62.7
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.6e-11 72.4 76 57.9
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-11 71.6 75 57.3
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.6e-11 71.2 74 54.1
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 4.7e-11 70.9 68 51.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 6.1e-11 70.5 65 55.4
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.0e-11 70.1 75 56.0
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 8.0e-11 70.1 82 54.9
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 8.0e-11 70.1 76 56.6
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 8.0e-11 70.1 73 63.0
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 1.0e-10 69.7 59 57.6
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 2.3e-10 68.6 76 55.3
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-10 68.2 65 55.4
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.0e-10 67.8 75 57.3
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 5.2e-10 67.4 76 53.9
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 6.8e-10 67.0 63 63.5
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 6.8e-10 67.0 74 44.6
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 8.9e-10 66.6 76 52.6
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 1.2e-09 66.2 67 55.2
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 65 55.4
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 2.0e-09 65.5 70 55.7
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.6e-09 65.1 64 64.1
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 3.4e-09 64.7 68 47.1
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 4.4e-09 64.3 68 45.6
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 4.4e-09 64.3 62 53.2
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 5.8e-09 63.9 75 46.7
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 9.8e-09 63.2 76 50.0
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 2.2e-08 62.0 75 46.7
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 2.9e-08 61.6 81 51.9
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 3.7e-08 61.2 74 44.6
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 6.4e-08 60.5 65 53.8
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.3e-08 60.1 76 56.6
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-07 59.7 72 55.6
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 56.5
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 2.4e-07 58.5 67 44.8
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.4e-07 58.5 78 43.6
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.2e-07 58.2 82 47.6
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 4.1e-07 57.8 79 44.3
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.2e-07 56.6 67 53.7
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.2e-06 56.2 82 51.2
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.6e-06 55.8 77 46.8
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 2.0e-06 55.5 85 45.9
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 2.0e-06 55.5 82 50.0
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 2.7e-06 55.1 79 44.3
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 2.7e-06 55.1 83 45.8
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 3.5e-06 54.7 72 48.6


User provided reference genes

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