Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-33 145.2 73 100.0
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.0e-27 123.2 73 84.9
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.4e-25 117.9 73 82.2
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-22 109.0 73 78.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-22 108.6 74 77.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-22 107.5 73 75.3
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-21 106.3 73 74.0
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-21 105.9 74 75.7
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-20 102.8 73 74.0
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-20 102.4 73 71.2
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.4e-18 95.9 74 70.3
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-18 95.5 74 70.3
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.8e-18 95.5 74 70.3
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.2e-18 94.0 74 67.6
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-17 92.8 72 68.1
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-17 92.4 73 69.9
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-17 91.3 73 67.1
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.4e-17 90.9 77 66.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-17 90.9 73 68.5
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-16 89.0 73 65.8
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.8e-16 88.2 76 68.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-16 88.2 74 59.5
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-16 88.2 74 59.5
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.8e-16 88.2 74 59.5
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 3.7e-16 87.8 75 62.7
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-16 87.8 73 67.1
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 6.3e-16 87.0 74 64.9
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 8.3e-16 86.7 74 62.2
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-15 85.9 80 67.5
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-15 85.9 69 66.7
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-15 85.5 80 66.2
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-15 85.5 80 66.2
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-15 84.7 69 66.7
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.1e-15 84.3 77 67.5
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.0e-15 83.6 74 64.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 9.2e-15 83.2 75 56.0
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 9.2e-15 83.2 74 62.2
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 1.6e-14 82.4 74 56.8
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-14 82.4 73 64.4
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-14 82.0 76 68.4
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.0e-14 82.0 77 58.4
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 3.5e-14 81.3 75 56.0
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.5e-14 81.3 75 62.7
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-14 80.9 80 65.0
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 4.6e-14 80.9 80 58.8
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.9e-14 80.5 78 67.9
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 5.9e-14 80.5 70 60.0
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 5.9e-14 80.5 74 55.4
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 5.9e-14 80.5 65 64.6
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.8e-14 80.1 75 61.3
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 76 67.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.0e-13 79.7 75 54.7
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 1.0e-13 79.7 66 65.2
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-13 79.3 69 59.4
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.7e-13 79.0 70 58.6
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.7e-13 79.0 74 55.4
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.7e-13 79.0 74 56.8
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 1.7e-13 79.0 74 54.1
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.7e-13 79.0 67 62.7
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 2.3e-13 78.6 75 54.7
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.3e-13 78.6 70 58.6
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.3e-13 78.6 74 52.7
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.9e-13 78.2 74 67.6
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-13 77.8 72 58.3
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.6e-13 77.0 74 63.5
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 8.6e-13 76.6 74 58.1
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.1e-12 76.3 75 61.3
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.5e-12 75.9 76 64.5
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.5e-12 75.9 76 64.5
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.5e-12 75.9 68 54.4
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.9e-12 75.5 74 51.4
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.3e-12 74.7 75 60.0
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 3.3e-12 74.7 80 60.0
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 4.3e-12 74.3 70 58.6
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.6e-12 73.9 74 47.3
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 5.6e-12 73.9 82 57.3
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.6e-11 72.4 59 62.7
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-11 72.4 76 63.2
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-11 71.6 77 58.4
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-11 71.6 70 57.1
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 6.1e-11 70.5 70 51.4
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-10 69.7 75 57.3
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.0e-10 69.7 81 51.9
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 59 57.6
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.8e-10 68.9 74 47.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 3.1e-10 68.2 70 57.1
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 4.0e-10 67.8 65 55.4
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 5.2e-10 67.4 76 55.3
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 6.8e-10 67.0 67 55.2
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 8.9e-10 66.6 75 48.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 8.9e-10 66.6 65 47.7
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 8.9e-10 66.6 76 53.9
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 1.2e-09 66.2 63 61.9
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-09 65.9 65 55.4
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.5e-09 65.9 76 55.3
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 3.4e-09 64.7 68 47.1
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-09 64.3 64 62.5
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 4.4e-09 64.3 76 53.9
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 5.8e-09 63.9 75 48.0
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 7.5e-09 63.5 68 50.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 9.8e-09 63.2 76 52.6
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 1.3e-08 62.8 76 48.7
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-08 62.0 72 56.9
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.7e-08 61.2 76 59.2
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 3.7e-08 61.2 62 53.2
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-08 61.2 69 58.0
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 8.3e-08 60.1 74 47.3
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 1.4e-07 59.3 65 53.8
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.9e-07 58.9 81 48.1
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.9e-07 58.9 68 54.4
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 4.1e-07 57.8 83 45.8
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 5.4e-07 57.4 77 49.4
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 5.4e-07 57.4 79 44.3
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.0e-07 57.0 70 48.6
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.2e-07 56.6 67 53.7
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 1.6e-06 55.8 81 45.7
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 2.0e-06 55.5 76 50.0
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.7e-06 55.1 67 46.3
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 2.7e-06 55.1 78 42.3
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 3.5e-06 54.7 77 40.3
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 3.5e-06 54.7 72 47.2
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 3.5e-06 54.7 72 47.2


User provided reference genes

Program Settings