Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.7e-42 174.1 86 100.0
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-30 134.4 74 89.2
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.2e-23 112.1 74 77.0
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-22 108.6 74 77.0
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-22 107.8 74 74.3
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.3e-22 107.5 74 73.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.3e-22 107.5 74 73.0
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-21 105.1 74 70.3
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-21 104.4 74 71.6
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-19 97.8 74 71.6
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-17 93.2 74 68.9
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.0e-17 91.7 75 69.3
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.0e-17 91.7 75 69.3
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.2e-17 90.9 73 71.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 5.2e-17 90.9 74 66.2
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 5.2e-17 90.9 75 68.0
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-17 90.5 83 62.7
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.8e-17 90.1 75 66.7
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-16 89.7 77 66.2
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.2e-16 89.7 75 62.7
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-16 89.4 74 66.2
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-16 89.0 73 64.4
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.6e-16 88.6 80 71.2
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.4e-16 88.2 80 70.0
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.4e-16 88.2 80 70.0
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-16 87.8 74 63.5
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 5.7e-16 87.4 71 64.8
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-15 86.3 71 64.8
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.7e-15 84.7 80 70.0
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 3.7e-15 84.7 77 58.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 4.8e-15 84.3 75 64.0
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 4.8e-15 84.3 80 62.5
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 6.3e-15 84.0 74 63.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 6.3e-15 84.0 74 55.4
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 6.3e-15 84.0 74 55.4
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.3e-15 83.6 76 64.5
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.3e-15 83.6 76 61.8
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 8.3e-15 83.6 76 61.8
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 8.3e-15 83.6 71 64.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 8.3e-15 83.6 71 64.8
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-14 83.2 74 59.5
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.1e-14 83.2 75 60.0
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-14 82.4 74 62.2
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-14 82.0 75 65.3
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-14 82.0 76 64.5
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-14 82.0 76 64.5
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.4e-14 82.0 78 62.8
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.4e-14 82.0 74 64.9
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.1e-14 81.6 73 67.1
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-14 81.6 74 62.2
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 3.1e-14 81.6 69 62.3
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 4.1e-14 81.3 75 57.3
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.1e-14 81.3 75 61.3
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-14 81.3 70 62.9
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 4.1e-14 81.3 75 61.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 5.4e-14 80.9 78 60.3
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 5.4e-14 80.9 75 57.3
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.0e-14 80.5 76 64.5
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 7.0e-14 80.5 75 57.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.0e-14 80.5 75 61.3
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 9.1e-14 80.1 82 57.3
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.2e-13 79.7 75 57.3
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.2e-13 79.7 76 63.2
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-13 79.3 73 64.4
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.6e-13 79.3 76 61.8
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.6e-13 79.3 80 61.2
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.6e-13 79.3 69 58.0
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.5e-13 78.2 76 61.8
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.5e-13 78.2 75 56.0
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 3.5e-13 78.2 71 60.6
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 4.5e-13 77.8 76 57.9
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 5.9e-13 77.4 75 54.7
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.7e-13 77.0 76 60.5
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 7.7e-13 77.0 76 52.6
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 7.7e-13 77.0 74 52.7
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 7.7e-13 77.0 76 60.5
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-12 76.6 78 61.5
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 1.0e-12 76.6 73 58.9
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 1.0e-12 76.6 75 53.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.3e-12 76.3 80 56.2
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.7e-12 75.9 76 55.3
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.7e-12 75.9 81 55.6
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 1.7e-12 75.9 76 59.2
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 2.3e-12 75.5 60 66.7
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.3e-12 75.5 76 60.5
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 2.3e-12 75.5 64 57.8
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.8e-12 74.7 75 58.7
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 3.8e-12 74.7 76 59.2
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 5.0e-12 74.3 74 51.4
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 8.6e-12 73.6 78 51.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 8.6e-12 73.6 75 52.0
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 8.6e-12 73.6 62 59.7
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.1e-11 73.2 76 53.9
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.1e-11 73.2 75 49.3
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-11 72.8 72 62.5
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.5e-11 72.8 77 48.1
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.9e-11 72.4 71 50.7
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 2.5e-11 72.0 72 52.8
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 3.3e-11 71.6 71 60.6
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 4.2e-11 71.2 76 51.3
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 4.2e-11 71.2 72 50.0
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.5e-11 70.9 75 52.0
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 9.5e-11 70.1 69 59.4
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 9.5e-11 70.1 69 59.4
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-09 66.6 75 53.3
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 1.0e-09 66.6 79 46.8
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 5.2e-09 64.3 76 48.7
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 5.2e-09 64.3 83 53.0
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 5.2e-09 64.3 82 53.7
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 5.2e-09 64.3 70 50.0
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.8e-09 63.9 77 59.7
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.2e-08 63.2 79 48.1
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 2.6e-08 62.0 61 60.7
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.6e-08 62.0 77 48.1
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.4e-08 61.6 75 53.3
AUR62002372 Chenopodium quinoa HOM05D020500 ORTHO05D021210 3.4e-08 61.6 72 44.4
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 4.4e-08 61.2 82 51.2
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 5.7e-08 60.8 79 43.0
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 9.8e-08 60.1 85 47.1
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 9.8e-08 60.1 77 50.6
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 1.3e-07 59.7 79 44.3
MELO3C027180.2 Cucumis melo HOM05D064062 ORTHO05D007460 1.3e-07 59.7 77 45.5
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 1.7e-07 59.3 71 53.5
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.7e-07 59.3 71 53.5
AUR62002617 Chenopodium quinoa HOM05D020500 ORTHO05D021210 2.8e-07 58.5 72 43.1
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.1e-06 56.6 78 46.2
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.1e-06 56.6 54 55.6
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.8e-06 55.8 82 39.0
AUR62002340 Chenopodium quinoa HOM05D038336 ORTHO05D038978 2.4e-06 55.5 70 44.3
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-06 54.7 74 52.7


User provided reference genes

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