Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-32 142.1 73 100.0
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.3e-32 139.8 73 97.3
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.2e-28 127.9 73 87.7
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.0e-27 123.2 73 86.3
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-22 109.0 73 79.5
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-21 105.9 74 73.0
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-21 105.9 73 75.3
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-21 105.9 73 72.6
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.3e-21 105.1 74 73.0
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 3.8e-21 104.4 73 75.3
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.6e-21 103.6 73 71.2
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 6.6e-21 103.6 73 74.0
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 8.6e-21 103.2 72 72.2
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-20 101.3 73 72.6
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.5e-20 100.5 74 71.6
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 5.5e-20 100.5 74 71.6
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.5e-20 99.8 74 78.4
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.6e-19 99.0 74 68.9
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-19 99.0 69 75.4
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-19 99.0 69 73.9
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-19 98.2 73 69.9
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 3.6e-19 97.8 74 68.9
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-18 96.3 73 72.6
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-18 96.3 77 74.0
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-18 95.9 73 68.5
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-18 95.9 73 69.9
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 3.0e-18 94.7 74 67.6
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.0e-18 94.4 77 68.8
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 5.2e-18 94.0 74 68.9
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-18 93.6 77 72.7
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-18 93.6 81 74.1
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-17 92.0 75 72.0
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.4e-17 90.9 76 72.4
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.4e-17 90.9 76 72.4
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-17 90.9 73 68.5
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.7e-17 90.5 76 71.1
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.7e-17 90.5 74 62.2
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 9.8e-17 89.7 74 62.2
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 9.8e-17 89.7 74 62.2
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 9.8e-17 89.7 74 62.2
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.3e-16 89.4 74 62.2
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-16 89.0 80 73.8
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.7e-16 89.0 74 64.9
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-16 88.6 80 72.5
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-16 88.6 80 72.5
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-16 87.8 73 68.5
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-16 87.8 69 66.7
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-16 87.0 76 71.1
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-15 86.3 75 68.0
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.1e-15 86.3 75 64.0
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 1.1e-15 86.3 74 62.2
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.4e-15 85.9 77 61.0
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 1.4e-15 85.9 75 60.0
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.4e-15 85.9 68 66.2
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.8e-15 85.5 74 59.5
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.8e-15 85.5 74 58.1
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.4e-15 85.1 74 62.2
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-15 84.7 76 68.4
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-15 84.7 76 65.8
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.2e-15 84.7 75 62.7
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 3.2e-15 84.7 70 62.9
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.4e-15 84.0 80 71.2
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.4e-15 84.0 72 70.8
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 5.4e-15 84.0 74 60.8
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 9.2e-15 83.2 72 62.5
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.2e-14 82.8 70 61.4
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.2e-14 82.8 82 61.0
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.6e-14 82.4 74 58.1
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.7e-14 81.6 70 60.0
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 3.5e-14 81.3 74 58.1
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 7.8e-14 80.1 74 58.1
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 7.8e-14 80.1 80 63.8
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.3e-13 79.3 68 57.4
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.3e-13 78.6 74 59.5
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 2.9e-13 78.2 75 53.3
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.9e-13 78.2 74 52.7
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-13 78.2 74 58.1
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 3.9e-13 77.8 80 60.0
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.0e-13 77.4 75 61.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 5.0e-13 77.4 74 54.1
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 5.0e-13 77.4 75 56.0
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 6.6e-13 77.0 58 69.0
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.6e-13 76.6 76 67.1
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-12 76.3 72 65.3
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.5e-12 75.9 75 54.7
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-12 75.5 72 63.9
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-12 75.1 73 65.8
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 2.5e-12 75.1 75 52.0
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 2.5e-12 75.1 72 63.9
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 5.6e-12 73.9 75 50.7
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 5.6e-12 73.9 78 53.8
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 5.6e-12 73.9 76 56.6
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 9.5e-12 73.2 74 54.1
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 9.5e-12 73.2 74 51.4
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 1.2e-11 72.8 75 50.7
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.6e-11 72.4 75 53.3
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 3.6e-11 71.2 76 59.2
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 4.7e-11 70.9 76 55.3
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.0e-11 70.1 75 64.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.8e-10 68.9 68 48.5
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.3e-10 68.6 70 60.0
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.9e-10 66.6 71 60.6
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 8.9e-10 66.6 76 52.6
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.2e-09 66.2 76 56.6
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.4e-09 64.7 76 56.6
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 4.4e-09 64.3 81 51.9
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 5.8e-09 63.9 63 52.4
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 7.5e-09 63.5 68 52.9
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 7.5e-09 63.5 76 55.3
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 3.7e-08 61.2 83 50.6
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.9e-08 60.8 74 52.7
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 4.9e-08 60.8 82 54.9
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 8.3e-08 60.1 61 57.4
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 49.3
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.4e-07 59.3 69 49.3
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 4.1e-07 57.8 81 49.4
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 4.1e-07 57.8 79 44.3
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 5.4e-07 57.4 82 52.4
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.2e-07 56.6 53 54.7
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 9.2e-07 56.6 85 48.2
AUR62002372 Chenopodium quinoa HOM05D020500 ORTHO05D021210 2.7e-06 55.1 72 45.8
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.7e-06 55.1 67 47.8
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.7e-06 55.1 70 50.0


User provided reference genes

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