Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-32 142.1 73 100.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-26 122.1 73 86.3
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-26 120.9 73 84.9
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.8e-25 116.3 73 80.8
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-20 102.1 73 72.6
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-20 101.7 74 71.6
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-20 100.9 74 71.6
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.2e-20 100.1 73 74.0
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-19 99.0 73 74.0
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.7e-19 97.4 73 69.9
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 6.8e-18 93.6 73 69.9
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.9e-18 93.2 73 69.9
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-17 92.4 72 68.1
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.0e-17 92.0 74 68.9
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.0e-17 92.0 74 68.9
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.7e-17 90.5 74 66.2
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 9.8e-17 89.7 73 67.1
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 9.8e-17 89.7 73 68.5
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 2.2e-16 88.6 74 64.9
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.7e-16 87.8 74 68.9
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 4.9e-16 87.4 69 68.1
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 4.9e-16 87.4 73 64.4
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.3e-16 86.7 81 71.6
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-15 86.3 69 68.1
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-15 85.5 77 70.1
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-15 85.1 74 70.3
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.4e-15 85.1 77 64.9
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 2.4e-15 85.1 74 60.8
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 3.2e-15 84.7 74 59.5
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-15 84.7 73 64.4
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.1e-15 84.3 74 59.5
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-15 84.3 73 64.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.0e-15 83.6 74 59.5
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 7.0e-15 83.6 74 59.5
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-14 82.0 75 66.7
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-14 82.0 73 65.8
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-14 82.0 69 62.3
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-14 81.6 77 66.2
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.7e-14 81.6 74 62.2
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 3.5e-14 81.3 74 59.5
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-14 80.9 76 64.5
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 4.6e-14 80.9 74 62.2
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.9e-14 80.5 76 65.8
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.9e-14 80.5 76 65.8
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.9e-14 80.5 76 65.8
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 5.9e-14 80.5 74 55.4
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.8e-14 80.1 75 66.7
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.8e-14 80.1 80 65.0
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 7.8e-14 80.1 74 58.1
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 7.8e-14 80.1 72 61.1
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 7.8e-14 80.1 68 63.2
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 80 63.8
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 80 63.8
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-13 79.0 76 68.4
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.9e-13 77.8 74 59.5
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-13 77.4 76 67.1
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 5.0e-13 77.4 77 58.4
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 5.0e-13 77.4 82 58.5
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 6.6e-13 77.0 75 60.0
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 6.6e-13 77.0 74 56.8
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 8.6e-13 76.6 75 56.0
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 8.6e-13 76.6 70 58.6
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-12 76.3 72 69.4
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.1e-12 76.3 75 56.0
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.9e-12 75.5 75 58.7
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-12 75.1 80 62.5
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 3.3e-12 74.7 75 54.7
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.3e-12 74.3 70 58.6
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 5.6e-12 73.9 74 54.1
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 7.3e-12 73.6 70 55.7
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 1.6e-11 72.4 75 53.3
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.6e-11 72.4 74 50.0
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 2.1e-11 72.0 75 52.0
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.1e-11 72.0 74 54.1
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 2.1e-11 72.0 76 55.3
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 3.6e-11 71.2 80 55.0
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 3.6e-11 71.2 74 52.7
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 3.6e-11 71.2 68 52.9
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 6.1e-11 70.5 70 58.6
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 8.0e-11 70.1 75 53.3
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.4e-10 69.3 76 57.9
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.4e-10 69.3 73 63.0
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.8e-10 68.9 58 62.1
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-10 68.9 75 57.3
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.3e-10 68.6 76 57.9
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.1e-10 68.2 74 55.4
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 3.1e-10 68.2 74 50.0
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-10 68.2 74 51.4
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.0e-10 67.8 75 50.7
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 5.2e-10 67.4 69 62.3
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.8e-10 67.0 76 63.2
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 6.8e-10 67.0 75 49.3
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 6.8e-10 67.0 59 54.2
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 8.9e-10 66.6 72 61.1
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 8.9e-10 66.6 76 56.6
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 1.2e-09 66.2 70 58.6
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 74 51.4
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 1.5e-09 65.9 74 51.4
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 2.0e-09 65.5 78 50.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 2.0e-09 65.5 76 55.3
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 3.4e-09 64.7 76 52.6
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 5.8e-09 63.9 76 51.3
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 7.5e-09 63.5 62 54.8
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.8e-09 63.2 71 57.7
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 2.2e-08 62.0 81 54.3
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.7e-08 61.2 73 58.9
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.3e-08 60.1 74 52.7
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-07 59.7 75 60.0
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 9.2e-07 56.6 61 54.1
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.2e-06 56.2 68 41.2
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.6e-06 55.8 79 44.3
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 2.0e-06 55.5 81 51.9
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 55.1 53 52.8
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.5e-06 54.7 77 46.8
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 3.5e-06 54.7 68 48.5
AUR62023815 Chenopodium quinoa HOM05D020500 ORTHO05D021210 6.0e-06 53.9 70 42.9
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 6.0e-06 53.9 82 50.0
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 6.0e-06 53.9 82 53.7
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 7.8e-06 53.5 82 41.5
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 7.8e-06 53.5 83 47.0


User provided reference genes

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