Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.3e-31 137.1 73 100.0
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.8e-25 116.3 73 89.0
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-19 98.2 74 78.4
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-19 98.2 73 78.1
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-18 94.4 77 74.0
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.8e-18 93.6 77 72.7
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-16 88.2 72 73.6
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-15 85.1 77 67.5
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.0e-15 83.6 75 69.3
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.2e-15 83.2 74 70.3
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-14 82.0 75 69.3
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-14 81.6 76 64.5
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.5e-14 81.3 77 66.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.9e-13 78.2 77 63.6
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.9e-13 78.2 77 63.6
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 2.9e-13 78.2 77 62.3
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.6e-13 76.6 77 61.0
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 8.6e-13 76.6 76 61.8
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 2.5e-12 75.1 76 60.5
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-12 74.7 76 60.5
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 5.6e-12 73.9 77 62.3
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.5e-12 73.2 78 61.5
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.2e-11 72.8 80 61.2
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-11 72.4 74 62.2
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-11 72.4 72 61.1
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-11 71.6 48 87.5
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-11 71.6 76 61.8
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.6e-11 71.2 77 59.7
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 3.6e-11 71.2 76 57.9
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 4.7e-11 70.9 77 57.1
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.1e-11 70.5 78 60.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.0e-10 69.7 80 57.5
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-10 69.3 77 54.5
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 74 59.5
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-10 68.9 77 58.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.3e-10 68.6 77 54.5
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.3e-10 68.6 77 54.5
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.1e-10 68.2 77 58.4
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.1e-10 68.2 79 64.6
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.1e-10 68.2 79 64.6
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.2e-10 67.4 79 63.3
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.2e-10 67.4 84 60.7
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 5.2e-10 67.4 74 56.8
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 6.8e-10 67.0 78 55.1
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 76 56.6
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 77 54.5
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.2e-09 66.2 67 59.7
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-09 65.9 77 58.4
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 2.0e-09 65.5 77 53.2
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 2.6e-09 65.1 76 57.9
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.4e-09 64.7 78 56.4
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 3.4e-09 64.7 85 56.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-09 64.3 77 53.2
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 5.8e-09 63.9 74 55.4
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.5e-09 63.5 80 60.0
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 7.5e-09 63.5 77 50.6
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 7.5e-09 63.5 83 56.6
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.8e-09 63.2 80 60.0
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 9.8e-09 63.2 78 55.1
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.3e-08 62.8 76 61.8
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.7e-08 62.4 77 50.6
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-08 62.0 80 60.0
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.9e-08 61.6 77 54.5
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-08 61.6 77 50.6
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 3.7e-08 61.2 77 49.4
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 3.7e-08 61.2 77 49.4
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 4.9e-08 60.8 74 52.7
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 4.9e-08 60.8 79 55.7
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.4e-08 60.5 79 57.0
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 8.3e-08 60.1 77 54.5
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.1e-07 59.7 78 47.4
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-07 59.3 79 60.8
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-07 59.3 79 60.8
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-07 59.3 75 53.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.9e-07 58.9 77 53.2
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 2.4e-07 58.5 61 60.7
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-07 58.5 79 60.8
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-07 58.2 77 61.0
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 3.2e-07 58.2 78 51.3
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-07 57.8 75 56.0
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 4.1e-07 57.8 67 50.7
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 5.4e-07 57.4 78 50.0
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 7.0e-07 57.0 77 46.8
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 9.2e-07 56.6 78 46.2
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.6e-06 55.8 78 53.8
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.6e-06 55.8 77 45.5
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 2.0e-06 55.5 78 44.9
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 3.5e-06 54.7 77 49.4
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 3.5e-06 54.7 77 42.9
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 4.6e-06 54.3 78 44.9
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 4.6e-06 54.3 81 49.4
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 4.6e-06 54.3 75 53.3
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 6.0e-06 53.9 75 53.3


User provided reference genes

Program Settings