Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-33 144.8 72 100.0
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.2e-24 113.6 72 83.3
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-19 98.6 73 72.6
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-19 98.2 73 71.2
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-18 95.5 69 76.8
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.9e-18 94.4 74 77.0
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.7e-18 93.6 76 68.4
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-17 92.0 72 73.6
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.3e-17 91.3 74 68.9
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.4e-17 90.1 77 66.2
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-16 88.2 75 69.3
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.3e-16 87.0 76 64.5
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-15 85.9 74 66.2
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-15 84.7 70 65.7
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-15 84.3 74 64.9
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.9e-15 83.6 74 63.5
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-14 82.8 70 65.7
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 2.6e-14 81.6 71 67.6
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-14 81.3 70 67.1
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 4.5e-14 80.9 70 64.3
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 7.7e-14 80.1 71 64.8
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.3e-13 79.3 74 60.8
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.3e-13 79.3 70 65.7
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.3e-13 79.3 70 65.7
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-13 79.0 70 64.3
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.8e-13 77.8 77 58.4
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.8e-13 77.8 73 58.9
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.8e-13 77.8 70 62.9
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 3.8e-13 77.8 72 61.1
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.1e-12 76.3 70 62.9
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 2.5e-12 75.1 70 60.0
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-12 74.7 69 69.6
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-12 74.3 69 69.6
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 5.5e-12 73.9 74 56.8
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-11 72.8 74 62.2
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.2e-11 72.8 71 57.7
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-11 72.4 71 63.4
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.6e-11 72.4 70 57.1
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.7e-11 71.6 70 57.1
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.7e-11 71.6 70 57.1
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 3.6e-11 71.2 65 66.2
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.6e-11 70.9 69 68.1
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 4.6e-11 70.9 71 56.3
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.1e-11 70.5 70 61.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 6.1e-11 70.5 70 57.1
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-10 69.7 69 66.7
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 1.0e-10 69.7 70 52.9
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.0e-10 69.7 72 52.8
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.8e-10 68.9 72 50.0
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 2.3e-10 68.6 71 50.7
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.3e-10 68.6 70 55.7
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 2.3e-10 68.6 73 53.4
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-10 68.2 72 62.5
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.0e-10 68.2 76 60.5
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 3.0e-10 68.2 71 49.3
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 3.0e-10 68.2 70 51.4
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 3.0e-10 68.2 69 59.4
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 3.0e-10 68.2 69 55.1
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.9e-10 67.8 73 60.3
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 5.1e-10 67.4 71 57.7
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 6.7e-10 67.0 73 58.9
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 6.7e-10 67.0 72 55.6
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 8.8e-10 66.6 71 49.3
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.5e-09 65.9 71 56.3
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.5e-09 65.9 70 50.0
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-09 65.5 72 62.5
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-09 65.5 72 62.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-09 65.5 72 54.2
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-09 65.1 72 62.5
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-09 65.1 72 62.5
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 3.3e-09 64.7 58 63.8
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.3e-09 64.7 76 60.5
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.3e-09 64.7 73 53.4
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-09 64.7 69 59.4
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 4.3e-09 64.3 72 56.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 7.4e-09 63.5 72 54.2
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 7.4e-09 63.5 76 53.9
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 9.7e-09 63.2 69 55.1
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 9.7e-09 63.2 73 49.3
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-08 62.8 72 51.4
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.3e-08 62.8 69 52.2
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-08 61.6 72 54.2
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-08 61.2 69 56.5
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 4.8e-08 60.8 73 47.9
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.8e-08 60.8 67 56.7
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-08 60.8 69 56.5
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 6.3e-08 60.5 70 45.7
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 8.2e-08 60.1 78 51.3
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.1e-07 59.7 76 52.6
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-07 59.7 69 52.2
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 1.4e-07 59.3 73 50.7
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-07 59.3 71 54.9
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.8e-07 58.9 75 46.7
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.8e-07 58.9 73 46.6
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-07 58.5 73 57.5
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 3.1e-07 58.2 72 50.0
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 3.1e-07 58.2 64 51.6
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 6.9e-07 57.0 72 50.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 9.1e-07 56.6 71 47.9
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-06 55.8 73 57.5
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 2.0e-06 55.5 74 47.3
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.6e-06 55.1 73 46.6
MELO3C027180.2 Cucumis melo HOM05D064062 ORTHO05D007460 3.4e-06 54.7 74 45.9
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 3.4e-06 54.7 69 52.2
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 3.4e-06 54.7 71 43.7
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.4e-06 54.7 72 48.6
AUR62002372 Chenopodium quinoa HOM05D020500 ORTHO05D021210 5.9e-06 53.9 69 43.5
AUR62002617 Chenopodium quinoa HOM05D020500 ORTHO05D021210 7.7e-06 53.5 69 42.0
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 7.7e-06 53.5 72 56.9
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 7.7e-06 53.5 72 47.2
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 7.7e-06 53.5 72 47.2


User provided reference genes

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