Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.0e-31 136.3 72 100.0
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-20 102.4 73 83.6
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.1e-19 97.1 72 77.8
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-15 85.1 72 70.8
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.1e-15 84.7 75 69.3
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-14 82.4 72 70.8
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-14 82.0 73 67.1
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-12 76.3 76 67.1
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-12 75.5 76 67.1
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.1e-11 72.0 76 60.5
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.1e-11 72.0 76 60.5
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.1e-11 70.5 76 63.2
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.1e-11 70.5 76 57.9
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-10 68.9 71 63.4
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-10 68.9 48 79.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-10 67.8 75 62.7
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.1e-10 67.4 76 63.2
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 6.7e-10 67.0 76 57.9
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 8.8e-10 66.6 75 61.3
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-09 65.9 75 60.0
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-09 65.5 75 60.0
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.5e-09 65.1 79 58.2
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 9.7e-09 63.2 75 58.7
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-08 62.4 71 54.9
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.7e-08 62.4 76 55.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.2e-08 62.0 79 55.7
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-08 62.0 71 57.7
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-08 61.6 76 57.9
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-08 61.6 73 60.3
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.7e-08 61.2 77 59.7
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.7e-08 61.2 77 59.7
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-08 60.5 78 61.5
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-08 60.5 78 61.5
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-07 59.3 76 56.6
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-07 59.3 78 59.0
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.4e-07 59.3 76 50.0
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-07 58.9 76 50.0
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-07 58.9 68 55.9
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-07 58.5 76 59.2
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-07 58.5 83 60.2
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.4e-07 58.5 77 53.2
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.4e-07 58.5 76 50.0
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 3.1e-07 58.2 76 50.0
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-07 58.2 73 57.5
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.1e-07 57.8 78 59.0
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.1e-07 57.8 77 53.2
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 5.3e-07 57.4 77 53.2
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-06 55.5 79 60.8
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.0e-06 55.5 76 51.3
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 2.0e-06 55.5 69 55.1
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 2.6e-06 55.1 76 48.7
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 2.6e-06 55.1 84 52.4
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 2.6e-06 55.1 75 56.0
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 4.5e-06 54.3 76 47.4
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 5.9e-06 53.9 76 50.0
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 5.9e-06 53.9 76 46.1
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 7.7e-06 53.5 76 50.0


User provided reference genes

Program Settings