Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-32 142.1 73 100.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-28 127.5 73 87.7
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-27 125.2 73 84.9
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.7e-25 117.1 73 80.8
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-21 105.9 73 76.7
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-21 105.5 74 73.0
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.3e-20 101.3 73 68.5
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-20 100.9 74 70.3
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.5e-20 100.5 73 71.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.2e-20 100.1 74 71.6
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 7.2e-20 100.1 74 71.6
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.6e-19 99.0 74 70.3
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.1e-19 98.6 74 68.9
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.8e-19 98.2 73 67.1
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 1.0e-18 96.3 73 68.5
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-18 95.5 72 68.1
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 5.2e-18 94.0 73 67.1
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 6.8e-18 93.6 73 68.5
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.9e-18 93.2 74 74.3
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.0e-17 92.0 74 64.9
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 2.0e-17 92.0 74 62.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-17 92.0 73 67.1
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.6e-17 91.7 81 72.8
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.4e-17 91.3 75 70.7
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.4e-17 91.3 74 66.2
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-17 91.3 69 69.6
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-17 90.9 76 68.4
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.4e-17 90.9 77 66.2
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.7e-17 90.5 73 64.4
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.7e-17 90.5 76 69.7
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.7e-17 90.5 76 69.7
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 5.7e-17 90.5 75 66.7
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.5e-17 90.1 76 68.4
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 7.5e-17 90.1 69 69.6
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 9.8e-17 89.7 75 66.7
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.3e-16 89.4 80 70.0
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.3e-16 89.4 77 63.6
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-16 89.0 80 68.8
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-16 89.0 80 68.8
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 1.7e-16 89.0 75 62.7
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.7e-16 89.0 74 64.9
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-16 88.6 77 68.8
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.2e-16 88.6 74 60.8
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 2.2e-16 88.6 75 66.7
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.2e-16 88.6 74 59.5
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-16 88.2 75 65.3
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 2.8e-16 88.2 74 62.2
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-16 88.2 73 65.8
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.7e-16 87.8 74 60.8
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.7e-16 87.8 74 60.8
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 3.7e-16 87.8 67 68.7
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 4.9e-16 87.4 74 63.5
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 6.3e-16 87.0 70 64.3
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.3e-16 86.7 77 67.5
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-15 86.3 74 60.8
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.4e-15 85.1 74 63.5
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.4e-15 85.1 66 68.2
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.1e-15 84.3 80 67.5
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 4.1e-15 84.3 68 64.7
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 5.4e-15 84.0 74 55.4
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 7.0e-15 83.6 69 63.8
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 9.2e-15 83.2 74 60.8
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-14 82.8 75 65.3
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.6e-14 82.4 58 74.1
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-14 82.0 76 67.1
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 2.0e-14 82.0 80 65.0
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-14 81.6 75 61.3
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 4.6e-14 80.9 74 59.5
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 4.6e-14 80.9 72 61.1
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 7.8e-14 80.1 74 55.4
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 76 64.5
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 76 61.8
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.0e-13 79.7 74 59.5
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.3e-13 79.3 75 62.7
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.3e-13 78.6 74 52.7
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-13 77.8 74 59.5
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 5.0e-13 77.4 82 57.3
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.5e-12 75.9 75 53.3
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.5e-12 75.9 74 54.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.9e-12 75.5 75 53.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.9e-12 75.5 78 56.4
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 4.3e-12 74.3 75 53.3
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 4.3e-12 74.3 68 55.9
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 9.5e-12 73.2 75 53.3
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 9.5e-12 73.2 80 57.5
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 1.2e-11 72.8 75 52.0
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.6e-11 72.4 75 52.0
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.8e-11 71.6 74 48.6
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.6e-11 71.2 76 63.2
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 3.6e-11 71.2 74 51.4
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 3.6e-11 71.2 59 59.3
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 6.1e-11 70.5 75 50.7
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 8.0e-11 70.1 76 55.3
Cfa015240 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.1e-10 68.2 73 61.6
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 4.0e-10 67.8 68 48.5
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 4.0e-10 67.8 72 58.3
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 5.2e-10 67.4 72 58.3
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 6.8e-10 67.0 76 56.6
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-09 66.2 71 57.7
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 1.2e-09 66.2 76 51.3
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.5e-09 65.9 76 52.6
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.0e-09 65.5 76 56.6
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.6e-09 65.1 70 57.1
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.4e-09 64.7 76 55.3
Cfa015234 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-09 64.3 75 60.0
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 4.4e-09 64.3 81 53.1
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 7.5e-09 63.5 76 53.9
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 1.3e-08 62.8 63 49.2
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 3.7e-08 61.2 61 59.0
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 6.4e-08 60.5 68 52.9
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.1e-07 59.7 79 43.0
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 1.1e-07 59.7 78 43.6
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.4e-07 58.5 77 49.4
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.2e-07 58.2 81 50.6
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 3.2e-07 58.2 85 50.6
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 5.4e-07 57.4 83 49.4
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-06 56.2 74 48.6
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.6e-06 55.8 82 50.0
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 2.7e-06 55.1 83 48.2
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 55.1 53 52.8
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.7e-06 55.1 76 46.1
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 2.7e-06 55.1 82 53.7
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 2.7e-06 55.1 69 47.8
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.6e-06 54.3 82 39.0
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 6.0e-06 53.9 67 49.3
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 7.8e-06 53.5 77 39.0


User provided reference genes

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