Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 4.2e-110 401.4 201 100.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.2e-82 309.3 187 87.7
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.9e-70 269.6 188 76.1
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 2.5e-70 269.2 170 82.4
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 7.2e-70 267.7 188 76.1
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 4.7e-61 238.4 171 71.9
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 9.8e-59 230.7 171 71.3
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 4.1e-57 225.3 171 69.6
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.2e-56 223.8 211 58.3
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.0e-55 220.7 188 63.8
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.7e-55 219.9 171 66.7
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 5.0e-55 218.4 171 66.7
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.0e-55 218.4 171 66.7
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.0e-55 218.4 171 66.7
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 3.3e-54 215.7 171 67.8
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 9.5e-54 214.2 171 65.5
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.2e-53 213.8 171 66.1
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 2.1e-53 213.0 171 63.2
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.8e-53 212.6 171 67.3
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 3.6e-53 212.2 171 67.3
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 1.8e-52 209.9 171 66.1
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 5.2e-52 208.4 171 62.6
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 6.8e-52 208.0 205 58.5
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.5e-51 206.8 171 65.5
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.5e-51 206.8 188 61.2
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.0e-51 206.5 171 62.6
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 2.6e-51 206.1 171 64.3
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 2.6e-51 206.1 171 64.3
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.4e-51 205.7 171 62.6
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 4.4e-51 205.3 171 67.8
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 9.8e-51 204.1 157 68.2
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 2.9e-50 202.6 188 58.0
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 5.4e-49 198.4 171 66.1
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 1.2e-48 197.2 171 63.2
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 2.5e-46 189.5 171 56.1
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.6e-46 188.3 171 60.8
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 9.5e-46 187.6 161 62.1
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.6e-45 186.8 176 58.5
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 6.2e-45 184.9 195 54.4
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 1.1e-44 184.1 171 58.5
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 1.5e-43 180.3 170 61.2
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 4.4e-43 178.7 176 58.5
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 4.4e-43 178.7 169 55.6
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.3e-42 177.2 177 54.8
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 1.3e-42 177.2 188 52.7
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.3e-42 177.2 170 58.8
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.3e-42 177.2 171 55.0
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.3e-42 177.2 169 55.0
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.3e-42 177.2 169 55.6
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.7e-42 176.8 173 55.5
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.7e-42 176.8 171 59.1
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.2e-42 176.4 169 55.6
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.9e-42 176.0 171 55.0
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 4.9e-42 175.3 173 54.9
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 6.4e-42 174.9 188 53.7
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.4e-41 173.7 170 57.1
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.4e-41 173.7 171 57.9
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 3.2e-41 172.6 190 54.2
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 4.1e-41 172.2 170 57.6
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 4.1e-41 172.2 169 53.8
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 5.4e-41 171.8 169 53.8
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 7.0e-41 171.4 183 52.5
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 9.2e-41 171.0 170 58.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 9.2e-41 171.0 171 56.1
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.2e-40 170.6 171 53.8
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.2e-40 170.6 170 58.8
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 7.8e-40 167.9 171 54.4
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.0e-39 167.5 170 57.6
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 1.3e-39 167.2 171 52.6
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-39 166.8 170 57.6
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-39 166.8 170 57.6
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.7e-39 166.8 191 53.9
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 5.1e-39 165.2 203 48.8
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 6.6e-39 164.9 191 53.9
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 8.6e-39 164.5 170 56.5
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 8.6e-39 164.5 170 56.5
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.1e-38 164.1 171 53.2
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.5e-38 163.7 171 53.2
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.5e-38 163.7 171 50.9
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.9e-38 163.3 170 56.5
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.9e-38 163.3 170 55.9
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 1.9e-38 163.3 171 50.9
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.5e-38 162.9 170 55.9
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 3.3e-38 162.5 189 51.3
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 4.3e-38 162.2 157 58.0
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 5.6e-38 161.8 188 53.2
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.2e-37 160.6 188 48.4
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.1e-37 159.8 170 52.9
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 2.8e-37 159.5 171 50.9
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 2.3e-36 156.4 180 51.1
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.3e-36 156.4 163 57.7
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 7.5e-35 151.4 172 47.7
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.7e-34 150.2 188 47.9
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.7e-34 150.2 171 49.1
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 5.4e-33 145.2 130 56.9
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.6e-32 143.7 120 64.2
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 2.3e-31 139.8 158 51.3
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 6.6e-31 138.3 169 50.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 3.3e-30 136.0 103 67.0
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 5.6e-30 135.2 184 42.9
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 9.5e-30 134.4 120 59.2
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 9.5e-30 134.4 184 42.9
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 3.6e-29 132.5 173 46.8
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 4.0e-28 129.0 169 47.3
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 5.4e-25 118.6 120 55.0
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 7.8e-24 114.8 108 58.3
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-22 110.2 120 50.0
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-22 110.2 120 50.8
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 7.3e-22 108.2 120 50.0
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.1e-21 106.7 120 49.2
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 6.2e-21 105.1 120 48.3
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.4e-20 104.0 178 38.2
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-19 100.1 122 46.7
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 9.6e-14 81.3 121 41.3
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.1e-12 77.8 168 31.0
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.1e-12 76.3 51 68.6
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 4.5e-11 72.4 158 27.8
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 1.2e-08 64.3 67 55.2


User provided reference genes

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