Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.3e-194 682.9 351 100.0
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 3.1e-132 475.7 374 69.8
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-123 446.8 337 70.6
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 2.0e-115 419.9 329 65.7
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 7.8e-112 407.9 330 63.3
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.7e-111 406.8 439 54.2
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.1e-110 404.1 356 60.4
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 5.2e-108 395.2 325 63.4
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 6.8e-108 394.8 325 63.1
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 8.9e-108 394.4 346 62.1
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 2.0e-107 393.3 344 61.9
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.9e-106 389.4 333 60.7
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 4.9e-106 388.7 340 59.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 4.9e-106 388.7 360 60.3
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.9e-105 386.7 327 63.0
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-104 384.0 319 63.6
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.6e-104 383.6 378 55.6
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.1e-104 383.3 352 59.4
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 7.8e-104 381.3 348 60.1
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 6.6e-103 378.3 346 59.8
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.5e-102 376.3 330 61.8
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 4.3e-102 375.6 343 60.3
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 5.6e-102 375.2 348 58.3
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 9.6e-102 374.4 343 60.3
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.8e-100 370.2 329 60.2
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 2.4e-100 369.8 326 60.7
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 3.1e-100 369.4 316 60.1
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 3.1e-100 369.4 347 55.9
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 3.1e-100 369.4 321 61.7
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.2e-99 367.5 331 60.1
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-99 367.5 331 60.1
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 2.0e-99 366.7 325 60.6
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 3.4e-99 365.9 326 61.7
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 4.4e-99 365.5 358 57.0
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 9.9e-99 364.4 331 60.4
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.7e-98 363.6 341 58.1
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 6.4e-98 361.7 325 60.6
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.1e-97 360.9 334 60.5
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.4e-97 360.5 331 60.1
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.4e-97 360.5 318 60.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 1.4e-97 360.5 352 56.8
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 3.2e-97 359.4 316 59.8
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 7.1e-97 358.2 330 59.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.2e-96 357.5 340 58.2
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.6e-96 357.1 331 58.9
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 2.7e-96 356.3 317 59.9
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.6e-96 355.5 338 56.8
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 4.6e-96 355.5 329 56.8
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 5.1e-95 352.1 344 57.6
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 6.6e-95 351.7 342 57.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.3e-94 349.0 340 57.1
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.6e-93 347.1 320 57.2
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.8e-93 345.5 350 56.0
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 8.1e-93 344.7 334 58.7
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 8.1e-93 344.7 347 53.9
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.4e-92 344.0 342 54.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.8e-92 343.6 328 58.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.2e-91 340.9 334 56.3
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 5.8e-91 338.6 316 58.9
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.3e-90 337.4 310 57.4
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.9e-90 336.3 359 50.1
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 4.9e-90 335.5 325 55.1
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 9.3e-89 331.3 356 50.6
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.6e-88 330.5 351 51.6
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.1e-88 330.1 354 52.0
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.1e-88 330.1 350 51.4
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.3e-87 327.4 328 53.0
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 5.1e-87 325.5 350 51.4
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 5.1e-87 325.5 350 51.4
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 5.1e-87 325.5 227 78.9
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.5e-86 323.9 355 49.3
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.9e-86 323.6 385 51.2
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 4.3e-86 322.4 349 50.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 9.6e-86 321.2 316 57.3
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.6e-85 320.5 364 49.5
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 3.7e-85 319.3 351 48.4
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 6.2e-85 318.5 321 55.5
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 6.2e-85 318.5 347 53.3
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.4e-84 316.6 316 55.7
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 4.5e-83 312.4 320 56.9
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 8.4e-82 308.1 344 52.0
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.1e-80 303.5 327 48.9
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 3.5e-80 302.8 271 60.9
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 4.6e-80 302.4 352 48.3
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 6.0e-80 302.0 346 50.3
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.3e-79 300.8 358 47.2
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.1e-78 297.7 279 56.3
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.5e-78 297.4 327 51.4
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 9.6e-78 294.7 349 46.4
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.8e-76 290.4 326 51.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.4e-76 290.0 262 59.5
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 1.9e-73 280.4 186 80.1
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.5e-70 270.8 311 51.1
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 3.1e-68 263.1 259 56.8
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.6e-64 249.6 375 39.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 9.1e-60 235.0 439 37.6
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.0e-54 217.2 225 53.8
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 4.0e-47 193.0 288 42.4
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 4.1e-44 183.0 372 31.2
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 6.5e-42 175.6 137 65.0
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 6.1e-40 169.1 359 32.9
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 6.1e-32 142.5 104 65.4
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 4.9e-29 132.9 97 68.0
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.4e-28 131.3 226 38.5
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 3.8e-26 123.2 480 24.8
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.5e-25 121.3 106 59.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.5e-22 111.3 80 73.8
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 8.3e-21 105.5 166 43.4
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 7.8e-19 99.0 86 59.3
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 8.6e-18 95.5 56 80.4
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.9e-17 94.4 98 52.0
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 2.5e-17 94.0 260 27.7
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.4e-15 88.2 256 27.7
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 4.4e-14 83.2 197 29.4
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 2.2e-13 80.9 64 59.4
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 4.9e-13 79.7 67 58.2
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-12 78.6 69 58.0
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 4.6e-11 73.2 43 79.1
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 7.8e-11 72.4 74 51.4
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.7e-10 71.2 60 55.0


User provided reference genes

Program Settings