Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 0.0e+00 1600.9 862 100.0
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 0.0e+00 1505.0 920 89.7
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 0.0e+00 1308.5 862 80.3
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 0.0e+00 1167.9 871 73.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 0.0e+00 1125.2 865 70.8
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 0.0e+00 1107.4 873 68.6
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 0.0e+00 1087.0 816 71.2
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 0.0e+00 1087.0 861 68.2
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 0.0e+00 1085.5 777 73.1
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 0.0e+00 1083.9 876 67.2
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 5.9e-312 1074.3 867 67.9
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.0e-310 1068.9 867 66.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 2.6e-310 1068.5 864 67.5
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.4e-310 1068.1 813 69.6
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 9.9e-310 1066.6 868 67.4
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.1e-307 1058.9 813 69.9
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 3.9e-306 1054.7 823 69.1
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.8e-304 1048.5 773 72.2
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 4.8e-304 1047.7 804 71.0
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.0e-303 1044.6 869 66.3
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.0e-302 1042.3 832 68.0
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.0e-301 1040.0 816 68.8
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.5e-300 1035.4 800 68.4
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 4.6e-299 1031.2 804 69.5
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.3e-298 1029.6 750 71.6
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.3e-298 1028.9 828 67.3
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.1e-296 1022.3 868 65.1
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 4.5e-294 1014.6 804 68.0
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 8.7e-290 1000.3 815 67.5
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 4.3e-289 998.0 792 67.0
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.8e-287 992.6 864 63.0
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.5e-286 989.6 798 66.2
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 4.5e-286 988.0 773 68.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.1e-284 983.4 717 72.4
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 7.2e-284 980.7 795 66.5
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 7.9e-283 977.2 818 64.9
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.9e-282 974.9 813 65.9
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 5.9e-278 961.1 812 63.7
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 5.0e-277 958.0 803 65.5
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.4e-276 956.4 814 64.3
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 2.0e-273 946.0 808 64.1
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 3.1e-271 938.7 808 62.6
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.0e-270 936.0 815 63.7
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 2.6e-270 935.6 817 63.4
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.7e-269 932.9 808 62.5
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.9e-268 929.5 797 64.1
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 9.4e-268 927.2 805 64.0
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.2e-265 920.2 815 62.3
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.7e-264 916.4 808 62.9
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.7e-264 915.2 813 63.2
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 7.0e-263 911.0 754 65.6
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 3.6e-259 898.7 793 62.8
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 6.1e-259 897.9 778 62.7
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 6.8e-258 894.4 785 60.5
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 8.8e-258 894.0 826 58.1
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.4e-257 891.7 817 60.0
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 9.8e-257 890.6 795 61.8
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.7e-256 889.8 791 59.2
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.8e-255 886.3 802 61.2
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 4.1e-255 885.2 758 63.5
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 5.4e-255 884.8 785 62.0
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 5.4e-255 884.8 822 59.0
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 7.0e-255 884.4 822 59.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 7.0e-255 884.4 796 62.2
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.2e-254 883.6 790 61.3
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 3.5e-254 882.1 822 59.0
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 5.9e-254 881.3 766 63.2
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.3e-253 880.2 785 61.8
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.3e-253 880.2 795 61.3
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 3.2e-252 875.5 785 59.6
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 4.2e-252 875.2 875 58.5
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 5.5e-252 874.8 819 59.7
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.1e-251 872.8 818 59.8
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 3.6e-251 872.1 827 58.9
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 6.6e-245 851.3 907 56.9
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.3e-244 847.8 818 58.7
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.4e-242 843.6 843 55.8
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.8e-242 843.2 701 65.9
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.3e-242 842.8 827 56.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 1.3e-240 837.0 804 59.8
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 8.9e-234 814.3 787 57.7
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.7e-232 810.1 723 61.3
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.6e-214 750.4 563 71.2
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 2.7e-214 749.6 736 55.3
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.9e-208 729.6 811 51.7
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 3.8e-200 702.6 815 50.9
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 6.4e-200 701.8 778 50.4
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.5e-196 689.9 495 72.7
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 6.9e-194 681.8 596 62.8
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.5e-188 664.1 589 60.6
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.3e-187 661.0 871 49.0
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 8.4e-184 648.3 579 63.2
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.2e-183 646.4 808 48.1
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.5e-180 637.5 726 52.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.5e-180 636.7 524 65.6
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.6e-179 634.0 486 68.9
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 2.0e-177 627.1 633 56.6
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.2e-171 607.1 587 58.8
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.2e-150 538.1 489 59.9
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 5.2e-149 532.7 487 60.2
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.0e-137 494.2 865 40.7
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.2e-122 443.7 783 36.8
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 4.1e-106 390.2 804 36.4
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 4.3e-103 380.2 281 71.5
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 4.0e-85 320.5 365 47.9
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.6e-84 317.8 255 65.5
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.9e-82 311.6 284 64.1
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.4e-82 311.2 617 33.7
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.4e-77 295.4 876 31.3
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 6.4e-75 286.6 205 71.7
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.1e-71 275.8 264 58.7
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.6e-65 253.8 220 59.5
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 4.6e-57 227.3 883 26.8
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 3.5e-28 131.3 156 47.4
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 7.5e-23 113.6 146 47.9
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.5e-18 98.6 108 54.6
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 4.0e-16 91.3 95 54.7
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 4.4e-15 87.8 68 64.7
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 3.9e-11 74.7 117 41.0
DCAR_025873 Daucus carota HOM05D001865 ORTHO05D001815 2.9e-06 58.5 175 32.0
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 6.4e-06 57.4 30 83.3


User provided reference genes

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