Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014930 Carpinus fangiana HOM05D020764 ORTHO05D017800 6.5e-199 697.2 354 100.0
Cfa012830 Carpinus fangiana HOM05D020764 ORTHO05D017800 5.5e-57 225.7 153 75.8
Cfa013098 Carpinus fangiana HOM05D002011 ORTHO05D001948 1.8e-39 167.5 101 83.2
Cfa019323 Carpinus fangiana HOM05D002011 ORTHO05D001948 2.1e-35 154.1 97 80.4
Cfa000123 Carpinus fangiana HOM05D020764 ORTHO05D017800 1.0e-34 151.8 207 51.2
QL02p020109 Quercus lobata HOM05D002011 ORTHO05D001948 3.5e-27 126.7 130 58.5
CiPaw.08G008100 Carya illinoinensis HOM05D002011 ORTHO05D001948 1.9e-25 120.9 104 67.3
CiPaw.07G227200 Carya illinoinensis HOM05D002011 ORTHO05D001948 3.6e-24 116.7 107 62.6
TWI32G0803 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 1.3e-21 108.2 105 62.9
Manes.16G126300 Manihot esculenta HOM05D002011 ORTHO05D001948 3.8e-21 106.7 141 48.2
Manes.03G011400 Manihot esculenta HOM05D002011 ORTHO05D001948 8.4e-21 105.5 110 55.5
TWI34G1253 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 1.2e-19 101.7 105 60.0
Cpa.g.sc127.2 Carica papaya HOM05D002011 ORTHO05D001948 2.7e-19 100.5 110 60.0
ClCG08G013560 Citrullus lanatus HOM05D002011 ORTHO05D001948 2.7e-19 100.5 146 47.9
FvH4_2g28270 Fragaria vesca HOM05D002011 ORTHO05D001948 7.8e-19 99.0 109 51.4
Gohir.A07G030600 Gossypium hirsutum HOM05D002011 ORTHO05D001948 2.3e-18 97.4 123 52.8
Duzib187G1916 Durio zibethinus HOM05D002011 ORTHO05D001948 3.9e-18 96.7 118 54.2
MELO3C011282.2 Cucumis melo HOM05D002011 ORTHO05D001948 6.6e-18 95.9 104 56.7
PGR044G0932 Punica granatum HOM05D002011 ORTHO05D001948 1.1e-17 95.1 134 45.5
Duzib168G0584 Durio zibethinus HOM05D002011 ORTHO05D001948 1.5e-17 94.7 113 57.5
RcHm_v2.0_Chr6g0297181 Rosa chinensis HOM05D002011 ORTHO05D001948 1.5e-17 94.7 115 50.4
CANSAT25G2050 Cannabis sativa HOM05D002011 ORTHO05D001948 1.9e-17 94.4 106 50.9
CsaV3_2G032320 Cucumis sativus L. HOM05D002011 ORTHO05D001948 2.5e-17 94.0 104 56.7
FAN24G0280 Fragaria x ananassa HOM05D002011 ORTHO05D001948 2.5e-17 94.0 112 50.0
Gohir.A05G057100 Gossypium hirsutum HOM05D002011 ORTHO05D001948 2.5e-17 94.0 106 59.4
Hma1.2p1_0228F.1_g096600 Hydrangea macrophylla HOM05D002011 ORTHO05D001948 3.3e-17 93.6 105 55.2
FAN15G2620 Fragaria x ananassa HOM05D002011 ORTHO05D001948 4.3e-17 93.2 113 50.4
FAN20G1038 Fragaria x ananassa HOM05D002011 ORTHO05D001948 4.3e-17 93.2 115 49.6
FAN27G0570 Fragaria x ananassa HOM05D002011 ORTHO05D001948 4.3e-17 93.2 115 49.6
Gorai.001G036200 Gossypium raimondii HOM05D002011 ORTHO05D001948 9.6e-17 92.0 119 52.1
Gohir.D07G034500 Gossypium hirsutum HOM05D002011 ORTHO05D001948 1.6e-16 91.3 119 52.1
Potri.006G259700 Populus trichocarpa HOM05D002011 ORTHO05D001948 1.6e-16 91.3 133 45.1
Sabra06G0202900 Salix brachista HOM05D002011 ORTHO05D001948 6.2e-16 89.4 135 44.4
Ca_15760_v3 Cicer arietinum L. HOM05D002011 ORTHO05D001948 8.1e-16 89.0 102 52.0
Atru.chr7.2505 Acer truncatum HOM05D002011 ORTHO05D001948 1.4e-15 88.2 114 56.1
MELO3C016985.2 Cucumis melo HOM05D002011 ORTHO05D001948 2.4e-15 87.4 115 48.7
Prupe.1G486600 Prunus persica HOM05D002011 ORTHO05D001948 2.4e-15 87.4 114 48.2
Thecc.09G019200 Theobroma cacao HOM05D002011 ORTHO05D001948 3.1e-15 87.0 93 60.2
TAR625G1096 Trochodendron aralioides HOM05D002011 ORTHO05D001948 4.0e-15 86.7 92 56.5
Phvul.009G090200 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 5.3e-15 86.3 102 52.9
CsaV3_4G036820 Cucumis sativus L. HOM05D002011 ORTHO05D001948 6.9e-15 85.9 112 49.1
Lj1g0007627 Lotus japonicus HOM05D002011 ORTHO05D001948 9.0e-15 85.5 105 50.5
Sed0005888 Sechium edule HOM05D002011 ORTHO05D001948 2.6e-14 84.0 106 49.1
VMungo1309G3164 Vigna mungo HOM05D002011 ORTHO05D001948 3.4e-14 83.6 102 52.0
Psat5g036760 Pisum sativum HOM05D002011 ORTHO05D001948 7.6e-14 82.4 105 49.5
Sed0017330 Sechium edule HOM05D002011 ORTHO05D001948 7.6e-14 82.4 102 52.9
BraA01t00593Z Brassica rapa HOM05D002011 ORTHO05D001948 1.7e-13 81.3 101 49.5
Sed0015470 Sechium edule HOM05D002011 ORTHO05D001948 2.2e-13 80.9 105 51.4
MD15G1131300 Malus domestica HOM05D002011 ORTHO05D001948 2.9e-13 80.5 114 44.7
TAR636G1642 Trochodendron aralioides HOM05D002011 ORTHO05D001948 2.9e-13 80.5 92 52.2
Actinidia23086 Actinidia chinensis HOM05D002011 ORTHO05D001948 3.8e-13 80.1 97 50.5
Lalb_Chr08g0244281 Lupinus albus HOM05D002011 ORTHO05D001948 4.9e-13 79.7 102 49.0
MD08G1154000 Malus domestica HOM05D002011 ORTHO05D001948 4.9e-13 79.7 114 46.5
BcaC09g51992 Brassica carinata HOM05D002011 ORTHO05D001948 8.4e-13 79.0 105 47.6
C01p06900 Brassica napus HOM05D002011 ORTHO05D001948 8.4e-13 79.0 105 47.6
BolC1t00687H Brassica oleracea HOM05D002011 ORTHO05D001948 8.4e-13 79.0 105 47.6
Medtr3g106340 Medicago truncatula HOM05D002011 ORTHO05D001948 1.1e-12 78.6 105 47.6
TWI63G1833 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 2.4e-12 77.4 105 50.5
vmacro11223 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 2.4e-12 77.4 103 46.6
A01p06260 Brassica napus HOM05D002011 ORTHO05D001948 4.2e-12 76.6 104 47.1
Ciclev10009242m.g Citrus clementina HOM05D002011 ORTHO05D001948 4.2e-12 76.6 108 48.1
TAR383G0822 Trochodendron aralioides HOM05D002011 ORTHO05D001948 4.2e-12 76.6 99 47.5
COL.COLO4_18921 Corchorus olitorius HOM05D002011 ORTHO05D001948 5.4e-12 76.3 84 59.5
Nn2g12257 Nelumbo nucifera HOM05D002011 ORTHO05D001948 7.1e-12 75.9 94 50.0
Nn8g39727 Nelumbo nucifera HOM05D002011 ORTHO05D001948 7.1e-12 75.9 91 48.4
Glyma.06G065100 Glycine max HOM05D002011 ORTHO05D001948 9.3e-12 75.5 88 52.3
THA.LOC104803849 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 9.3e-12 75.5 101 47.5
CSS0035080 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 2.1e-11 74.3 104 47.1
TAR626G1639 Trochodendron aralioides HOM05D002011 ORTHO05D001948 2.1e-11 74.3 94 46.8
Dinv18151 Davidia involucrata HOM05D002011 ORTHO05D001948 2.7e-11 73.9 98 45.9
Glyma.04G063900 Glycine max HOM05D002011 ORTHO05D001948 6.0e-11 72.8 86 53.5
THA.LOC104799044 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 6.0e-11 72.8 109 43.1
Eucgr.C02724 Eucalyptus grandis HOM05D002011 ORTHO05D001948 7.8e-11 72.4 115 46.1
Actinidia13206 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.0e-10 72.0 96 44.8
Ah.10g035660 Amaranthus hybridus HOM05D002011 ORTHO05D001948 1.7e-10 71.2 141 39.7
Thhalv10004910m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 2.3e-10 70.9 107 43.0
arahy.Tifrunner.gnm1.ann1.97EW8A Arachis hypogaea HOM05D002011 ORTHO05D001948 3.9e-10 70.1 137 36.5
CSS0039956 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 5.1e-10 69.7 103 43.7
Actinidia22311 Actinidia chinensis HOM05D002011 ORTHO05D001948 6.6e-10 69.3 96 42.7
GSVIVG01035917001 Vitis vinifera HOM05D002011 ORTHO05D001948 6.6e-10 69.3 84 51.2
arahy.Tifrunner.gnm1.ann1.KT90FJ Arachis hypogaea HOM05D002011 ORTHO05D001948 8.7e-10 68.9 123 38.2
BcaC01g01041 Brassica carinata HOM05D002011 ORTHO05D001948 8.7e-10 68.9 109 42.2
BolC3t21060H Brassica oleracea HOM05D002011 ORTHO05D001948 8.7e-10 68.9 109 42.2
Lalb_Chr23g0268371 Lupinus albus HOM05D002011 ORTHO05D001948 8.7e-10 68.9 101 44.6
Sp2g22330 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.5e-09 68.2 115 38.3
A03p61210 Brassica napus HOM05D002011 ORTHO05D001948 1.9e-09 67.8 89 48.3
BraA03t15165Z Brassica rapa HOM05D002011 ORTHO05D001948 2.5e-09 67.4 89 46.1
Thhalv10025671m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 2.5e-09 67.4 111 45.0
Sed0021865 Sechium edule HOM05D002011 ORTHO05D001948 2.5e-09 67.4 102 42.2
Sc23g0006520 Simmondsia chinensis HOM05D002011 ORTHO05D001948 2.5e-09 67.4 88 47.7
Dinv23313 Davidia involucrata HOM05D002011 ORTHO05D001948 3.3e-09 67.0 103 41.7
Eucgr.C01684 Eucalyptus grandis HOM05D002011 ORTHO05D001948 3.3e-09 67.0 64 59.4
Sp7g29830 Schrenkiella parvula HOM05D002011 ORTHO05D001948 3.3e-09 67.0 93 48.4
THA.LOC104814118 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 3.3e-09 67.0 111 39.6
CSS0040463 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 4.3e-09 66.6 89 44.9
Cc08_g00170 Coffea canephora HOM05D002011 ORTHO05D001948 4.3e-09 66.6 97 51.5
Dinv03417 Davidia involucrata HOM05D002011 ORTHO05D001948 4.3e-09 66.6 103 43.7
Rhsim12G0188600 Rhododendron simsii HOM05D002011 ORTHO05D001948 5.6e-09 66.2 93 45.2
BcaNung03208 Brassica carinata HOM05D002011 ORTHO05D001948 7.3e-09 65.9 98 42.9
Ciclev10026302m.g Citrus clementina HOM05D002011 ORTHO05D001948 7.3e-09 65.9 134 37.3
CARHR116290 Cardamine hirsuta HOM05D002011 ORTHO05D001948 9.6e-09 65.5 108 44.4
Aa31LG11G4430 Aethionema arabicum HOM05D002011 ORTHO05D001948 1.3e-08 65.1 104 44.2
A08p18360 Brassica napus HOM05D002011 ORTHO05D001948 2.1e-08 64.3 107 43.0
Cpa.g.sc10.124 Carica papaya HOM05D002011 ORTHO05D001948 2.1e-08 64.3 105 41.0
AL6G36860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 2.8e-08 63.9 107 40.2
AT4G32030 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 2.8e-08 63.9 95 43.2
BraA08t33793Z Brassica rapa HOM05D002011 ORTHO05D001948 2.8e-08 63.9 107 43.0
Carub.0007s0852 Capsella rubella HOM05D002011 ORTHO05D001948 2.8e-08 63.9 96 44.8
QL05p034085 Quercus lobata HOM05D002011 ORTHO05D001948 2.8e-08 63.9 106 44.3
THA.LOC104803640 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 2.8e-08 63.9 104 42.3
CARHR188280 Cardamine hirsuta HOM05D002011 ORTHO05D001948 3.6e-08 63.5 104 41.3
BcaNung03130 Brassica carinata HOM05D002011 ORTHO05D001948 4.8e-08 63.2 111 43.2
MSTRG.11167 Avicennia marina HOM05D002011 ORTHO05D001948 6.2e-08 62.8 89 43.8
EL10Ac2g04150 Beta vulgaris HOM05D002011 ORTHO05D001948 6.2e-08 62.8 136 41.9
BcaNung02288 Brassica carinata HOM05D002011 ORTHO05D001948 6.2e-08 62.8 98 41.8
BolC7t44794H Brassica oleracea HOM05D002011 ORTHO05D001948 6.2e-08 62.8 98 41.8
BraA04t17554Z Brassica rapa HOM05D002011 ORTHO05D001948 6.2e-08 62.8 108 43.5
THA.LOC104818603 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 6.2e-08 62.8 152 34.9
AL7G19860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 8.1e-08 62.4 112 42.0
arahy.Tifrunner.gnm1.ann1.KH3NQE Arachis hypogaea HOM05D002011 ORTHO05D001948 8.1e-08 62.4 110 40.9
arahy.Tifrunner.gnm1.ann1.ZE8HCZ Arachis hypogaea HOM05D002011 ORTHO05D001948 8.1e-08 62.4 111 40.5
A06p35950 Brassica napus HOM05D002011 ORTHO05D001948 8.1e-08 62.4 98 41.8
CARHR239930 Cardamine hirsuta HOM05D002011 ORTHO05D001948 8.1e-08 62.4 91 45.1
Carub.0006s2302 Capsella rubella HOM05D002011 ORTHO05D001948 1.1e-07 62.0 107 39.3
ClCG05G016560 Citrullus lanatus HOM05D002011 ORTHO05D001948 1.1e-07 62.0 102 42.2
PSO063G4963 Papaver somniferum HOM05D002011 ORTHO05D001948 1.1e-07 62.0 101 37.6
Rhsim02G0206600 Rhododendron simsii HOM05D002011 ORTHO05D001948 1.1e-07 62.0 97 44.3
AT5G25210 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 1.4e-07 61.6 106 38.7
A04p19630 Brassica napus HOM05D002011 ORTHO05D001948 1.4e-07 61.6 108 42.6
C07p42640 Brassica napus HOM05D002011 ORTHO05D001948 1.4e-07 61.6 98 41.8
Thhalv10000568m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 1.4e-07 61.6 94 44.7
Nitab4.5_0002992g0100 Nicotiana tabacum HOM05D002011 ORTHO05D001948 1.4e-07 61.6 116 45.7
Oeu010089.1 Olea europaea HOM05D002011 ORTHO05D001948 1.4e-07 61.6 87 46.0
Oeu060123.1 Olea europaea HOM05D002011 ORTHO05D001948 1.4e-07 61.6 121 43.0
Ah.16g104840 Amaranthus hybridus HOM05D002011 ORTHO05D001948 1.8e-07 61.2 105 46.7
BraA06t26521Z Brassica rapa HOM05D002011 ORTHO05D001948 1.8e-07 61.2 98 40.8
Oeu009209.1 Olea europaea HOM05D002011 ORTHO05D001948 1.8e-07 61.2 89 43.8
SGA_v2.0_scaffold37G14736 Striga asiatica HOM05D002011 ORTHO05D001948 1.8e-07 61.2 143 35.7
BcaC02g08361 Brassica carinata HOM05D002011 ORTHO05D001948 4.0e-07 60.1 111 42.3
BcaNung06960 Brassica carinata HOM05D002011 ORTHO05D001948 4.0e-07 60.1 111 42.3
C04p55210 Brassica napus HOM05D002011 ORTHO05D001948 4.0e-07 60.1 111 42.3
CAN.G407.39 Capsicum annuum HOM05D002011 ORTHO05D001948 4.0e-07 60.1 92 42.4
HanXRQChr02g0050131 Helianthus annuus HOM05D002011 ORTHO05D001948 4.0e-07 60.1 99 37.4
Actinidia08950 Actinidia chinensis HOM05D002011 ORTHO05D001948 5.3e-07 59.7 101 40.6
MSTRG.9415 Avicennia marina HOM05D002011 ORTHO05D001948 5.3e-07 59.7 89 41.6
C07p59060 Brassica napus HOM05D002011 ORTHO05D001948 5.3e-07 59.7 89 46.1
BolC7t46354H Brassica oleracea HOM05D002011 ORTHO05D001948 5.3e-07 59.7 89 46.1
CARHR016310 Cardamine hirsuta HOM05D002011 ORTHO05D001948 5.3e-07 59.7 110 39.1
Thhalv10019140m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 5.3e-07 59.7 92 39.1
PSO782G4733 Papaver somniferum HOM05D002011 ORTHO05D001948 5.3e-07 59.7 101 36.6
Thhalv10008783m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 6.9e-07 59.3 110 36.4
Actinidia25442 Actinidia chinensis HOM05D002011 ORTHO05D001948 9.0e-07 58.9 144 34.0
BcaB03g12730 Brassica carinata HOM05D002011 ORTHO05D001948 9.0e-07 58.9 112 42.9
Nitab4.5_0008673g0020 Nicotiana tabacum HOM05D002011 ORTHO05D001948 1.2e-06 58.5 92 42.4
Sp5g35160 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.2e-06 58.5 107 35.5
Lj5C77G14 Lonicera japonica HOM05D002011 ORTHO05D001948 1.5e-06 58.2 103 40.8
Oeu027834.1 Olea europaea HOM05D002011 ORTHO05D001948 1.5e-06 58.2 126 36.5
SalBow7G0591 Salvia bowleyana HOM05D002011 ORTHO05D001948 1.5e-06 58.2 89 42.7
Sp4g04360 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.5e-06 58.2 112 40.2
AUR62012450 Chenopodium quinoa HOM05D002011 ORTHO05D001948 2.0e-06 57.8 94 40.4
Nitab4.5_0005934g0050 Nicotiana tabacum HOM05D002011 ORTHO05D001948 2.0e-06 57.8 92 41.3
unitig_62.g23779 Utricularia gibba HOM05D002011 ORTHO05D001948 2.0e-06 57.8 96 43.8
Actinidia18229 Actinidia chinensis HOM05D002011 ORTHO05D001948 2.6e-06 57.4 92 38.0
BolC4t27060H Brassica oleracea HOM05D002011 ORTHO05D001948 2.6e-06 57.4 111 41.4
AUR62031573 Chenopodium quinoa HOM05D002011 ORTHO05D001948 2.6e-06 57.4 94 40.4
AL2G40840 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 4.5e-06 56.6 92 38.0
AT1G80610 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 5.8e-06 56.2 95 40.0
BcaB06g28049 Brassica carinata HOM05D002011 ORTHO05D001948 5.8e-06 56.2 108 38.9
Migut.D01093 Erythranthe guttata HOM05D002011 ORTHO05D001948 5.8e-06 56.2 93 41.9
Hund29456 Selenicereus undatus HOM05D002011 ORTHO05D001948 5.8e-06 56.2 96 39.6
Hund29458 Selenicereus undatus HOM05D002011 ORTHO05D001948 5.8e-06 56.2 96 39.6
AT1G15800 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 7.6e-06 55.8 139 32.4
ECA233G4134 Erigeron canadensis HOM05D002011 ORTHO05D001948 7.6e-06 55.8 97 41.2
Gohir.D06G190800 Gossypium hirsutum HOM05D002011 ORTHO05D001948 7.6e-06 55.8 94 38.3
Nitab4.5_0009186g0020 Nicotiana tabacum HOM05D002011 ORTHO05D001948 7.6e-06 55.8 114 43.0
Sc09g0010370 Simmondsia chinensis HOM05D002011 ORTHO05D001948 7.6e-06 55.8 86 39.5
Thecc.06G036100 Theobroma cacao HOM05D002011 ORTHO05D001948 7.6e-06 55.8 93 44.1
Aa31LG4G890 Aethionema arabicum HOM05D002011 ORTHO05D001948 9.9e-06 55.5 90 35.6
Carub.0002s2694 Capsella rubella HOM05D002011 ORTHO05D001948 9.9e-06 55.5 106 35.8
Haze_16633 Corylus avellana HOM05D002011 ORTHO05D001948 9.9e-06 55.5 93 39.8
Haze_16635 Corylus avellana HOM05D002011 ORTHO05D001948 9.9e-06 55.5 93 39.8
HanXRQChr13g0403741 Helianthus annuus HOM05D002011 ORTHO05D001948 9.9e-06 55.5 102 35.3
TWI18G0546 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 9.9e-06 55.5 90 41.1


User provided reference genes

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