Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014912 Carpinus fangiana HOM05D000609 ORTHO05D000462 4.9e-180 634.4 332 100.0
Haze_11611 Corylus avellana HOM05D000609 ORTHO05D000462 1.9e-152 542.7 440 71.6
QL06p024916 Quercus lobata HOM05D000609 ORTHO05D000462 2.3e-73 280.0 428 47.9
Potri.017G055400 Populus trichocarpa HOM05D000609 ORTHO05D000462 9.5e-59 231.5 472 40.3
Duzib151G0668 Durio zibethinus HOM05D000609 ORTHO05D000462 2.1e-58 230.3 445 41.1
COL.COLO4_09890 Corchorus olitorius HOM05D000609 ORTHO05D000462 3.6e-58 229.6 460 40.7
Thecc.04G203500 Theobroma cacao HOM05D000609 ORTHO05D000462 1.2e-56 224.6 449 40.5
Duzib268G1214 Durio zibethinus HOM05D000609 ORTHO05D000462 7.5e-56 221.9 436 39.2
CiPaw.01G120900 Carya illinoinensis HOM05D000609 ORTHO05D000462 2.7e-53 213.4 457 38.1
Manes.15G053900 Manihot esculenta HOM05D000609 ORTHO05D000462 1.7e-52 210.7 451 39.2
Potri.001G315300 Populus trichocarpa HOM05D000609 ORTHO05D000462 2.8e-50 203.4 479 38.4
Gohir.A10G125000 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.0e-48 197.2 448 38.6
Gohir.D10G141500 Gossypium hirsutum HOM05D000609 ORTHO05D000462 4.4e-48 196.1 445 38.2
Gorai.011G157500 Gossypium raimondii HOM05D000609 ORTHO05D000462 2.2e-47 193.7 443 38.1
CSS0012926 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 2.9e-47 193.4 448 36.2
Sabra17G0046900 Salix brachista HOM05D000609 ORTHO05D000462 2.9e-47 193.4 470 36.2
Sabra17G0049100 Salix brachista HOM05D000609 ORTHO05D000462 2.9e-47 193.4 470 36.2
TAR362G0716 Trochodendron aralioides HOM05D000609 ORTHO05D000462 3.7e-47 193.0 427 36.3
CSS0003523 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 5.4e-46 189.1 448 35.5
Duzib212G0619 Durio zibethinus HOM05D000609 ORTHO05D000462 3.5e-45 186.4 446 35.7
Dinv38232 Davidia involucrata HOM05D000609 ORTHO05D000462 4.6e-45 186.0 397 40.3
Sabra16G0199500 Salix brachista HOM05D000609 ORTHO05D000462 3.0e-44 183.3 472 36.0
Hma1.2p1_0187F.1_g082150 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 1.9e-43 180.6 442 36.0
CiPaw.02G066200 Carya illinoinensis HOM05D000609 ORTHO05D000462 2.1e-42 177.2 462 38.3
TAR636G0487 Trochodendron aralioides HOM05D000609 ORTHO05D000462 2.4e-38 163.7 439 34.2
Rhsim09G0056900 Rhododendron simsii HOM05D000609 ORTHO05D000462 4.1e-38 162.9 439 34.6
MD04G1009000 Malus domestica HOM05D000609 ORTHO05D000462 2.5e-35 153.7 476 32.6
GSVIVG01021060001 Vitis vinifera HOM05D000609 ORTHO05D000462 4.3e-35 152.9 425 35.5
Glyma.20G197000 Glycine max HOM05D000609 ORTHO05D000462 4.4e-32 142.9 432 31.0
Lj5g0014862 Lotus japonicus HOM05D000609 ORTHO05D000462 8.4e-31 138.7 432 32.4
Nn3g20034 Nelumbo nucifera HOM05D000609 ORTHO05D000462 2.4e-30 137.1 439 30.1
Cc03_g07870 Coffea canephora HOM05D000609 ORTHO05D000462 4.2e-30 136.3 446 32.5
TWI09G1321 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 1.2e-29 134.8 427 32.8
vmacro00469 Vaccinium macrocarpon HOM05D000609 ORTHO05D000462 1.2e-29 134.8 444 32.4
Prupe.1G008400 Prunus persica HOM05D000609 ORTHO05D000462 7.8e-29 132.1 470 31.7
RcHm_v2.0_Chr4g0415231 Rosa chinensis HOM05D000609 ORTHO05D000462 6.6e-28 129.0 467 33.8
Glyma.10G193400 Glycine max HOM05D000609 ORTHO05D000462 2.5e-27 127.1 410 31.5
FAN17G1695 Fragaria x ananassa HOM05D000609 ORTHO05D000462 2.1e-26 124.0 467 34.5
Phvul.007G135300 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 3.6e-26 123.2 410 30.0
Nn1g07883 Nelumbo nucifera HOM05D000609 ORTHO05D000462 6.2e-26 122.5 442 28.3
FAN07G1283 Fragaria x ananassa HOM05D000609 ORTHO05D000462 8.1e-26 122.1 462 34.0
Oeu026526.1 Olea europaea HOM05D000609 ORTHO05D000462 3.1e-25 120.2 446 29.6
FAN22G0052 Fragaria x ananassa HOM05D000609 ORTHO05D000462 1.2e-24 118.2 464 33.2
Oeu013805.1 Olea europaea HOM05D000609 ORTHO05D000462 2.0e-24 117.5 410 31.7
VMungo0720G0222 Vigna mungo HOM05D000609 ORTHO05D000462 3.4e-24 116.7 409 29.1
FAN12G3916 Fragaria x ananassa HOM05D000609 ORTHO05D000462 5.8e-24 115.9 464 33.6
Medtr1g090170 Medicago truncatula HOM05D000609 ORTHO05D000462 1.3e-23 114.8 430 31.2
Ciclev10007069m.g Citrus clementina HOM05D000609 ORTHO05D000462 8.4e-23 112.1 245 35.9
Actinidia33182 Actinidia chinensis HOM05D000609 ORTHO05D000462 3.2e-22 110.2 428 30.8
Actinidia35862 Actinidia chinensis HOM05D000609 ORTHO05D000462 2.1e-21 107.5 434 31.8
Dinv27236 Davidia involucrata HOM05D000609 ORTHO05D000462 2.7e-21 107.1 261 34.9
TPR.G22199 Trifolium pratense HOM05D000609 ORTHO05D000462 1.9e-19 100.9 267 31.8
Lj6P553T14 Lonicera japonica HOM05D000609 ORTHO05D000462 2.8e-18 97.1 360 33.1
Gorai.006G222600 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.4e-17 94.7 411 29.0
DCAR_024472 Daucus carota HOM05D000609 ORTHO05D000462 5.3e-17 92.8 420 31.0
Gohir.D09G199000 Gossypium hirsutum HOM05D000609 ORTHO05D000462 5.3e-17 92.8 410 29.0
Manes.03G147500 Manihot esculenta HOM05D000609 ORTHO05D000462 2.6e-16 90.5 365 30.7
Psat6g170920 Pisum sativum HOM05D000609 ORTHO05D000462 1.1e-14 85.1 420 30.2
Aqoxy2G03858 Aquilegia oxysepala HOM05D000609 ORTHO05D000462 2.4e-14 84.0 396 25.3
Sc13g0000200 Simmondsia chinensis HOM05D000609 ORTHO05D000462 2.4e-14 84.0 449 26.9
Nitab4.5_0001416g0060 Nicotiana tabacum HOM05D000609 ORTHO05D000462 9.3e-14 82.0 445 27.0
MELO3C020448.2 Cucumis melo HOM05D000609 ORTHO05D000462 1.2e-13 81.6 448 29.5
TWI73G0567 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 1.6e-13 81.3 255 31.0
Peaxi162Scf00047g00524 Petunia axillaris HOM05D000609 ORTHO05D000462 2.1e-13 80.9 320 29.4
Nitab4.5_0000898g0170 Nicotiana tabacum HOM05D000609 ORTHO05D000462 7.9e-13 79.0 444 27.5
Gohir.A09G205300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 1.8e-12 77.8 393 27.5
Sed0021235 Sechium edule HOM05D000609 ORTHO05D000462 2.3e-12 77.4 428 27.1
Nitab4.5_0000898g0070 Nicotiana tabacum HOM05D000609 ORTHO05D000462 3.9e-12 76.6 444 26.6
THA.LOC104821868 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 5.1e-12 76.3 241 32.8
Lalb_Chr06g0169771 Lupinus albus HOM05D000609 ORTHO05D000462 1.5e-11 74.7 434 27.6
CsaV3_2G011540 Cucumis sativus L. HOM05D000609 ORTHO05D000462 5.6e-11 72.8 421 29.5
C04p42280 Brassica napus HOM05D000609 ORTHO05D000462 7.4e-11 72.4 423 29.1
BolC4t25807H Brassica oleracea HOM05D000609 ORTHO05D000462 7.4e-11 72.4 423 29.1
BcaC02g09402 Brassica carinata HOM05D000609 ORTHO05D000462 9.6e-11 72.0 423 29.1
BcaB03g16064 Brassica carinata HOM05D000609 ORTHO05D000462 1.3e-10 71.6 426 29.1
DCAR_026614 Daucus carota HOM05D000609 ORTHO05D000462 2.1e-10 70.9 421 27.6
AT4G13620 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 3.7e-10 70.1 414 29.0
EL10Ac3g07485 Beta vulgaris HOM05D000609 ORTHO05D000462 1.4e-09 68.2 80 53.8
A04p08530 Brassica napus HOM05D000609 ORTHO05D000462 1.4e-09 68.2 422 28.2
BraA04t16546Z Brassica rapa HOM05D000609 ORTHO05D000462 1.4e-09 68.2 422 28.2
arahy.Tifrunner.gnm1.ann1.17GHQZ Arachis hypogaea HOM05D000609 ORTHO05D000462 2.4e-09 67.4 132 37.1
CARHR219330 Cardamine hirsuta HOM05D000609 ORTHO05D000462 3.1e-09 67.0 291 28.9
AL7G42950 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 9.0e-09 65.5 415 28.7
Oeu049028.1 Olea europaea HOM05D000609 ORTHO05D000462 9.0e-09 65.5 105 44.8
Migut.N00388 Erythranthe guttata HOM05D000609 ORTHO05D000462 1.5e-08 64.7 442 28.1
Sp7g11330 Schrenkiella parvula HOM05D000609 ORTHO05D000462 2.6e-08 63.9 429 26.6
Ah.13g078150 Amaranthus hybridus HOM05D002428 ORTHO05D000462 3.4e-08 63.5 102 48.0
Eucgr.H02782 Eucalyptus grandis HOM05D000609 ORTHO05D000462 3.4e-08 63.5 87 49.4
MBI11_g00137_MAGBIO Magnolia biondii HOM05D000609 ORTHO05D000462 5.8e-08 62.8 462 26.0
MBI11_g36937_MAGBIO Magnolia biondii HOM05D000609 ORTHO05D000462 7.6e-08 62.4 422 27.5
Atru.chr4.1701 Acer truncatum HOM05D000609 ORTHO05D000462 1.7e-07 61.2 66 60.6
Carub.0007s2891 Capsella rubella HOM05D000609 ORTHO05D000462 2.9e-07 60.5 413 27.4
Solyc09g091950.1 Solanum lycopersicum HOM05D000609 ORTHO05D000462 7.1e-06 55.8 316 26.9


User provided reference genes

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