Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 5.0e-77 290.8 126 100.0
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 9.4e-76 286.6 126 98.4
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.1e-71 273.1 124 93.5
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.8e-71 272.3 126 92.9
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 5.9e-70 267.3 125 92.0
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.4e-63 245.4 122 82.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.4e-63 245.4 121 84.3
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 4.1e-63 244.6 126 81.0
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.6e-62 242.7 122 82.8
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 5.9e-62 240.7 122 83.6
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 7.7e-62 240.4 126 81.0
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 8.6e-61 236.9 122 79.5
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 7.2e-60 233.8 126 78.6
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.2e-59 233.0 124 78.2
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 3.6e-59 231.5 124 77.4
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.1e-59 230.7 125 78.4
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 8.0e-59 230.3 121 79.3
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.0e-58 229.9 123 76.4
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.0e-57 225.7 120 78.3
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.9e-56 221.9 121 77.7
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.4e-55 219.5 123 78.0
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.1e-55 218.0 122 75.4
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.2e-54 216.5 122 73.8
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 2.7e-54 215.3 122 73.8
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 4.6e-54 214.5 125 70.4
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 7.8e-54 213.8 121 71.9
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 1.0e-53 213.4 121 71.1
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.7e-53 212.6 123 73.2
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 6.6e-53 210.7 122 68.0
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 6.6e-53 210.7 122 68.0
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 8.6e-53 210.3 126 70.6
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.1e-52 209.9 122 70.5
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.5e-52 209.5 124 66.9
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.9e-52 209.1 123 69.9
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 7.3e-52 207.2 124 71.0
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 7.3e-52 207.2 120 73.3
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.2e-51 206.5 122 68.9
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.6e-51 206.1 124 69.4
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 2.8e-51 205.3 107 77.6
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 4.7e-51 204.5 122 69.7
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 6.2e-51 204.1 128 66.4
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.4e-50 203.0 113 76.1
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.4e-50 203.0 135 64.4
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.4e-50 203.0 121 67.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.8e-50 202.6 107 79.4
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 3.1e-50 201.8 127 64.6
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.2e-49 199.9 120 65.8
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 2.0e-49 199.1 127 64.6
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.7e-48 196.1 116 69.0
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 4.9e-48 194.5 119 68.1
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 4.1e-47 191.4 110 72.7
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 4.1e-47 191.4 122 63.9
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 7.0e-47 190.7 107 70.1
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 7.0e-47 190.7 118 71.2
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 2.0e-46 189.1 103 73.8
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 4.3e-44 181.4 134 54.5
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 2.8e-43 178.7 118 63.6
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 5.2e-42 174.5 121 61.2
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 2.6e-41 172.2 105 66.7
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 9.2e-39 163.7 98 67.3
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.6e-38 161.4 104 66.3
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.3e-37 159.1 86 79.1
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.9e-36 156.0 98 65.3
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.8e-34 149.4 106 56.6
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.5e-33 146.4 120 50.8
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 7.1e-31 137.5 128 51.6
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 7.8e-30 134.0 125 50.4
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 3.0e-29 132.1 74 71.6
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.5e-25 119.8 52 88.5
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 5.8e-25 117.9 73 65.8
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.1e-23 113.6 109 44.0
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.4e-23 113.2 59 74.6
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 2.7e-22 109.0 55 81.8
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 1.9e-20 102.8 105 43.8
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.4e-18 96.7 112 41.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.4e-18 95.9 93 48.4
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.4e-15 85.9 108 37.0
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.7e-14 82.4 111 34.2
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.4e-10 70.1 159 30.8
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.4e-10 69.3 38 73.7


User provided reference genes

Program Settings