Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 9.5e-26 119.4 60 100.0
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 7.5e-23 109.8 60 88.3
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 3.0e-19 97.8 60 78.3
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 1.5e-18 95.5 59 79.7
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 1.5e-18 95.5 59 79.7
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.5e-18 95.5 59 76.3
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 1.9e-18 95.1 59 78.0
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 2.5e-18 94.7 60 76.7
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 3.3e-18 94.4 58 79.3
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 7.3e-18 93.2 60 76.7
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 9.5e-18 92.8 59 78.0
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 9.5e-18 92.8 59 78.0
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 9.5e-18 92.8 59 74.6
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 1.2e-17 92.4 60 78.3
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.6e-17 92.0 60 78.3
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 1.6e-17 92.0 59 81.4
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 2.1e-17 91.7 60 75.0
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 2.8e-17 91.3 59 76.3
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 4.7e-17 90.5 60 75.0
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 8.1e-17 89.7 58 81.0
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.4e-16 89.0 60 73.3
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 3.1e-16 87.8 60 76.7
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 3.1e-16 87.8 59 71.2
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 4.0e-16 87.4 58 81.0
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 5.2e-16 87.0 60 78.3
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.2e-15 85.9 60 70.0
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.5e-15 85.5 59 76.3
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.5e-15 85.5 59 76.3
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.5e-15 85.5 59 76.3
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 2.6e-15 84.7 61 72.1
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 4.4e-15 84.0 58 77.6
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 4.4e-15 84.0 58 77.6
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 5.8e-15 83.6 60 66.7
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 1.3e-14 82.4 58 75.9
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.3e-14 82.4 60 66.7
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 1.3e-14 82.4 58 65.5
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.7e-14 82.0 60 68.3
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.9e-14 81.3 58 65.5
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.9e-14 81.3 58 65.5
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 3.7e-14 80.9 61 65.6
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.9e-14 80.5 47 85.1
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 6.4e-14 80.1 59 66.1
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.4e-13 79.0 60 71.7
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 1.4e-13 79.0 58 63.8
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 2.4e-13 78.2 61 65.6
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 3.2e-13 77.8 60 68.3
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 4.1e-13 77.4 62 61.3
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 5.4e-13 77.0 58 63.8
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 5.4e-13 77.0 56 67.9
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 7.1e-13 76.6 62 61.3
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 9.2e-13 76.3 60 70.0
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 1.2e-12 75.9 58 63.8
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 1.2e-12 75.9 60 66.7
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.6e-12 75.5 60 63.3
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.6e-12 75.5 60 70.0
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 2.1e-12 75.1 61 65.6
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.7e-12 74.7 60 71.7
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.7e-12 74.7 60 66.7
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 3.5e-12 74.3 60 61.7
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 3.5e-12 74.3 64 62.5
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 6.0e-12 73.6 60 61.7
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.8e-12 73.2 60 68.3
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.8e-12 73.2 60 65.0
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 1.0e-11 72.8 60 60.0
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.0e-11 72.8 59 69.5
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.0e-11 72.8 59 69.5
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.0e-11 72.8 59 69.5
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.0e-11 72.8 60 70.0
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 60.0
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 60.0
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 58.3
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 58.3
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 58.3
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 58.3
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 58.3
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 66.7
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 68.3
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.3e-11 72.4 60 68.3
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 1.7e-11 72.0 53 64.2
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 1.7e-11 72.0 60 58.3
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 3.0e-11 71.2 60 60.0
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 3.0e-11 71.2 58 63.8
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 5.1e-11 70.5 56 64.3
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 6.6e-11 70.1 54 68.5
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 6.6e-11 70.1 62 58.1
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 8.6e-11 69.7 60 55.0
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 8.6e-11 69.7 60 55.0
Gorai.005G130300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.1e-10 69.3 60 66.7
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 1.5e-10 68.9 61 60.7
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.5e-10 68.9 59 66.1
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 1.9e-10 68.6 64 57.8
Gohir.D03G098800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.9e-10 68.6 60 63.3
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 2.5e-10 68.2 54 63.0
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.3e-10 67.8 59 64.4
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 4.3e-10 67.4 58 58.6
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 9.5e-10 66.2 61 60.7
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 9.5e-10 66.2 61 60.7
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.2e-09 65.9 59 64.4
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.2e-09 65.9 60 60.0
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.2e-09 65.9 60 60.0
Gorai.003G103700 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.1e-09 65.1 60 60.0
Gohir.D04G080000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.8e-09 64.7 58 63.8
Gohir.D10G139400 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.8e-09 64.7 59 62.7
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.8e-09 64.7 61 59.0
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.8e-09 64.7 61 59.0
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.6e-09 64.3 58 63.8
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 4.7e-09 63.9 63 55.6
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 4.7e-09 63.9 61 57.4
Atru.chr1.877 Acer truncatum HOM05D006167 ORTHO05D007635 1.1e-08 62.8 47 70.2
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 1.1e-08 62.8 61 52.5
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 1.4e-08 62.4 74 47.3
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.4e-08 62.4 61 54.1
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 1.8e-08 62.0 53 60.4
Gorai.010G122300 Gossypium raimondii HOM05D006167 ORTHO05D007635 8.9e-08 59.7 52 63.5
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 8.9e-08 59.7 68 47.1
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 4.4e-07 57.4 62 51.6
A02p27890 Brassica napus HOM05D016819 ORTHO05D017546 9.9e-07 56.2 55 61.8
BraA02t07827Z Brassica rapa HOM05D016819 ORTHO05D017546 9.9e-07 56.2 55 61.8
TAR629G1972 Trochodendron aralioides HOM05D006167 ORTHO05D007635 9.9e-07 56.2 51 52.9
Aa31LG8G10950 Aethionema arabicum HOM05D006167 ORTHO05D007635 1.7e-06 55.5 57 56.1
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 2.2e-06 55.1 61 50.8
BolC2t10448H Brassica oleracea HOM05D016819 ORTHO05D017546 2.9e-06 54.7 51 60.8
Pp3c5_19670 Physcomitrium patens HOM05D006167 ORTHO05D007635 2.9e-06 54.7 55 58.2
HPP92_017313 Vanilla planifolia HOM05D006167 ORTHO05D007635 4.9e-06 53.9 45 64.4


User provided reference genes

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