Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.9e-142 508.1 244 100.0
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.3e-137 493.0 244 97.1
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 2.5e-109 399.1 252 76.6
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.5e-109 399.1 246 79.3
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.1e-107 393.7 238 77.7
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 6.9e-107 391.0 249 74.7
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 6.9e-107 391.0 244 77.0
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.2e-106 390.2 247 76.5
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.5e-106 389.8 247 76.5
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.4e-106 388.7 246 76.8
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 5.8e-106 387.9 249 75.1
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.3e-105 386.7 246 76.4
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.3e-105 386.7 242 77.3
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.7e-105 386.3 251 74.9
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 2.9e-105 385.6 246 74.4
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.4e-104 383.3 242 76.9
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.9e-104 382.9 245 74.3
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 2.4e-104 382.5 244 76.2
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 3.2e-104 382.1 255 72.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.2e-104 382.1 242 76.4
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 4.2e-104 381.7 246 75.6
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 5.4e-104 381.3 247 76.1
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 9.3e-104 380.6 244 73.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.2e-103 380.2 249 74.3
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.2e-103 380.2 258 72.1
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.6e-103 379.8 217 81.6
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.1e-103 379.4 242 76.0
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.9e-103 377.5 217 80.6
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.0e-102 377.1 248 72.2
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.9e-102 375.2 226 77.9
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 6.7e-102 374.4 244 75.0
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 8.7e-102 374.0 217 79.3
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.1e-101 373.6 248 72.6
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.5e-101 373.2 226 77.4
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.3e-101 371.7 252 73.8
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.3e-100 370.2 243 72.8
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 3.7e-100 368.6 244 72.1
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 4.8e-100 368.2 248 73.0
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 4.8e-100 368.2 246 72.4
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 6.2e-100 367.9 246 72.0
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 8.1e-100 367.5 242 70.7
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.1e-99 367.1 252 69.8
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.1e-99 367.1 268 70.1
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-99 366.3 225 74.7
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.8e-99 366.3 214 78.0
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 1.8e-99 366.3 246 72.8
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.4e-99 365.9 246 72.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.4e-99 365.9 217 79.3
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 3.1e-99 365.5 225 74.2
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 3.1e-99 365.5 244 70.5
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 4.0e-99 365.2 242 71.1
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.0e-99 365.2 243 70.8
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 4.0e-99 365.2 225 74.2
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 5.3e-99 364.8 235 71.9
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 5.3e-99 364.8 244 70.9
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 5.3e-99 364.8 240 73.3
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 6.9e-99 364.4 235 71.5
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.0e-98 362.8 214 77.1
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 2.6e-98 362.5 225 73.8
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.6e-98 362.5 235 71.1
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 4.5e-98 361.7 242 72.7
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 7.6e-98 360.9 255 68.2
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 7.6e-98 360.9 243 70.0
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.6e-98 360.9 225 73.8
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 9.9e-98 360.5 222 75.7
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 9.9e-98 360.5 225 73.3
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 9.9e-98 360.5 249 68.7
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 9.9e-98 360.5 243 69.5
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 9.9e-98 360.5 243 70.4
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.3e-97 360.1 226 73.0
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.3e-97 360.1 221 73.8
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.3e-97 360.1 237 71.3
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 1.7e-97 359.8 235 71.9
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.7e-97 359.8 218 74.8
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.2e-97 359.4 240 70.0
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.9e-97 359.0 217 76.5
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 3.8e-97 358.6 235 71.5
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 8.4e-97 357.5 223 74.4
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.1e-96 357.1 248 69.0
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 1.1e-96 357.1 244 69.3
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.5e-96 354.8 215 76.3
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 2.1e-95 352.8 244 68.4
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 3.5e-95 352.1 251 68.9
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 4.6e-95 351.7 221 72.9
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 2.3e-94 349.4 244 69.3
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 3.9e-94 348.6 240 69.6
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 6.7e-94 347.8 227 70.9
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 8.7e-94 347.4 234 70.9
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 2.5e-93 345.9 231 71.0
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.6e-92 343.2 198 78.8
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 4.8e-92 341.7 233 69.5
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 4.0e-91 338.6 212 75.0
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.2e-90 337.0 214 74.8
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.7e-89 333.2 220 71.8
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 4.9e-89 331.6 217 70.5
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.9e-88 329.7 343 51.6
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.2e-87 327.0 268 61.6
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.9e-80 303.1 197 71.6
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 2.5e-80 302.8 205 70.2
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 6.1e-79 298.1 195 74.4
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.0e-78 297.4 196 72.4
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 9.1e-75 284.3 163 79.1
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.8e-73 278.9 221 61.1
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 6.5e-73 278.1 215 62.8
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 5.9e-66 255.0 212 58.0
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.1e-63 246.5 218 54.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 7.0e-59 231.5 141 77.3
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 9.4e-56 221.1 188 58.5
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.1e-48 197.6 101 90.1
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 3.0e-46 189.5 218 49.5
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 4.0e-46 189.1 133 68.4
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.8e-43 180.3 210 47.6
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.9e-41 172.9 102 80.4
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 4.9e-36 155.6 210 43.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.8e-35 153.7 214 41.1
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.9e-33 146.4 95 74.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.9e-33 146.4 95 74.7
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 9.5e-32 141.4 83 75.9
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 9.5e-32 141.4 113 62.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 1.0e-30 137.9 142 51.4
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 1.0e-30 137.9 142 51.4
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 6.8e-30 135.2 99 65.7
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.3e-25 120.9 96 61.5
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.3e-24 116.3 79 68.4
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.8e-23 113.2 82 68.3
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.1e-22 109.8 62 80.6
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.1e-19 101.3 68 66.2
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 9.2e-19 98.2 188 36.7
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.5e-18 96.3 55 80.0
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 4.6e-18 95.9 204 33.8
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 8.9e-14 81.6 186 32.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 3.4e-13 79.7 67 55.2
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 3.7e-12 76.3 49 75.5


User provided reference genes

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