Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014783 Carpinus fangiana HOM05D001602 ORTHO05D001470 3.2e-33 144.4 69 100.0
Cfa014666 Carpinus fangiana HOM05D001602 ORTHO05D001470 1.5e-30 135.6 70 94.3
Haze_13255 Corylus avellana HOM05D001602 ORTHO05D001470 3.6e-29 131.0 66 92.4
MD03G1234000 Malus domestica HOM05D001602 ORTHO05D001470 3.2e-25 117.9 67 77.6
QL08p040515 Quercus lobata HOM05D001602 ORTHO05D001470 3.2e-25 117.9 66 78.8
FvH4_6g26750 Fragaria vesca HOM05D001602 ORTHO05D001470 5.4e-25 117.1 66 78.8
FAN05G5437 Fragaria x ananassa HOM05D001602 ORTHO05D001470 5.4e-25 117.1 66 78.8
FAN14G4128 Fragaria x ananassa HOM05D001602 ORTHO05D001470 5.4e-25 117.1 66 78.8
Gohir.A03G154400 Gossypium hirsutum HOM05D001602 ORTHO05D001470 7.1e-25 116.7 68 75.0
Gohir.D02G177300 Gossypium hirsutum HOM05D001602 ORTHO05D001470 7.1e-25 116.7 68 75.0
Gorai.005G199000 Gossypium raimondii HOM05D001602 ORTHO05D001470 7.1e-25 116.7 68 75.0
RcHm_v2.0_Chr0c19g0500101 Rosa chinensis HOM05D001602 ORTHO05D001470 7.1e-25 116.7 66 78.8
Thecc.02G187300 Theobroma cacao HOM05D001602 ORTHO05D001470 9.2e-25 116.3 65 80.0
COL.COLO4_37678 Corchorus olitorius HOM05D001602 ORTHO05D001470 2.1e-24 115.2 69 75.4
ClCG02G010320 Citrullus lanatus HOM05D001602 ORTHO05D001470 2.7e-24 114.8 66 74.2
MELO3C019331.2 Cucumis melo HOM05D001602 ORTHO05D001470 3.5e-24 114.4 66 74.2
Duzib052G0615 Durio zibethinus HOM05D001602 ORTHO05D001470 3.5e-24 114.4 65 80.0
Oeu022441.1 Olea europaea HOM05D001602 ORTHO05D001470 3.5e-24 114.4 63 79.4
Sed0021598 Sechium edule HOM05D001602 ORTHO05D001470 7.8e-24 113.2 66 74.2
Sed0023020 Sechium edule HOM05D001602 ORTHO05D001470 7.8e-24 113.2 66 74.2
Cpa.g.sc83.104 Carica papaya HOM05D001602 ORTHO05D001470 1.0e-23 112.8 65 75.4
CiPaw.03G182300 Carya illinoinensis HOM05D001602 ORTHO05D001470 1.0e-23 112.8 64 75.0
CsaV3_2G034470 Cucumis sativus L. HOM05D001602 ORTHO05D001470 1.0e-23 112.8 66 71.2
Ca_17938_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 1.3e-23 112.5 66 74.2
BcaB07g30966 Brassica carinata HOM05D001602 ORTHO05D001470 2.3e-23 111.7 64 75.0
CANSAT64G1522 Cannabis sativa HOM05D001602 ORTHO05D001470 2.3e-23 111.7 66 72.7
SpUn0826_0010 Schrenkiella parvula HOM05D001602 ORTHO05D001470 3.0e-23 111.3 64 75.0
A09p20940 Brassica napus HOM05D001602 ORTHO05D001470 3.9e-23 110.9 64 75.0
BraA09t37694Z Brassica rapa HOM05D001602 ORTHO05D001470 3.9e-23 110.9 64 75.0
Manes.12G086100 Manihot esculenta HOM05D001602 ORTHO05D001470 3.9e-23 110.9 65 75.4
BolC9t55550H Brassica oleracea HOM05D001602 ORTHO05D001470 5.1e-23 110.5 64 75.0
TWI59G0871 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 5.1e-23 110.5 66 72.7
Lj1A709T37 Lonicera japonica HOM05D001602 ORTHO05D001470 6.6e-23 110.2 64 75.0
Aa31LG5G3070 Aethionema arabicum HOM05D001602 ORTHO05D001470 8.6e-23 109.8 66 71.2
BcaC04g21860 Brassica carinata HOM05D001602 ORTHO05D001470 8.6e-23 109.8 64 73.4
C09p26540 Brassica napus HOM05D001602 ORTHO05D001470 8.6e-23 109.8 64 73.4
Thhalv10003267m.g Eutrema salsugineum HOM05D001602 ORTHO05D001470 8.6e-23 109.8 64 73.4
Sc12g0003250 Simmondsia chinensis HOM05D001602 ORTHO05D001470 8.6e-23 109.8 65 72.3
THA.LOC104801156 Tarenaya hassleriana HOM05D001602 ORTHO05D001470 8.6e-23 109.8 66 71.2
Ciclev10016518m.g Citrus clementina HOM05D001602 ORTHO05D001470 1.1e-22 109.4 60 81.7
Glyma.13G293900 Glycine max HOM05D001602 ORTHO05D001470 1.1e-22 109.4 66 71.2
PSO541G3055 Papaver somniferum HOM05D001602 ORTHO05D001470 1.1e-22 109.4 64 73.4
SalBow7G4457 Salvia bowleyana HOM05D001602 ORTHO05D001470 1.1e-22 109.4 64 75.0
CARHR179100 Cardamine hirsuta HOM05D001602 ORTHO05D001470 1.5e-22 109.0 64 73.4
PSO675G8974 Papaver somniferum HOM05D001602 ORTHO05D001470 1.5e-22 109.0 64 75.0
Psat5g273960 Pisum sativum HOM05D001602 ORTHO05D001470 1.9e-22 108.6 66 72.7
Medtr2g090740 Medicago truncatula HOM05D001602 ORTHO05D001470 2.5e-22 108.2 66 69.7
TPR.G6417 Trifolium pratense HOM05D001602 ORTHO05D001470 2.5e-22 108.2 66 71.2
Atru.chr6.2863 Acer truncatum HOM05D001602 ORTHO05D001470 3.3e-22 107.8 66 71.2
CSS0047535 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 3.3e-22 107.8 64 73.4
Hund01012 Selenicereus undatus HOM05D001602 ORTHO05D001470 3.3e-22 107.8 66 72.7
Hma1.2p1_0734F.1_g210350 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 4.3e-22 107.5 64 71.9
AT5G44170 Arabidopsis thaliana HOM05D001602 ORTHO05D001470 5.6e-22 107.1 64 73.4
unitig_46.g18246 Utricularia gibba HOM05D001602 ORTHO05D001470 5.6e-22 107.1 66 69.7
Phvul.005G100000 Phaseolus vulgaris HOM05D001602 ORTHO05D001470 7.3e-22 106.7 65 72.3
VMungo1080G1085 Vigna mungo HOM05D001602 ORTHO05D001470 9.6e-22 106.3 66 71.2
Aqoxy1G02290 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 1.2e-21 105.9 64 73.4
Aqoxy1G02294 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 1.2e-21 105.9 64 73.4
Cc05_g07780 Coffea canephora HOM05D001602 ORTHO05D001470 1.2e-21 105.9 68 69.1
DCAR_013041 Daucus carota HOM05D001602 ORTHO05D001470 1.2e-21 105.9 64 73.4
MD11G1254400 Malus domestica HOM05D001602 ORTHO05D001470 1.2e-21 105.9 67 73.1
Nn1g04250 Nelumbo nucifera HOM05D001602 ORTHO05D001470 1.2e-21 105.9 64 70.3
AL8G15850 Arabidopsis lyrata HOM05D001602 ORTHO05D001470 1.6e-21 105.5 64 71.9
Carub.0008s0435 Capsella rubella HOM05D001602 ORTHO05D001470 1.6e-21 105.5 64 71.9
TAR624G1452 Trochodendron aralioides HOM05D001602 ORTHO05D001470 1.6e-21 105.5 66 71.2
Actinidia39331 Actinidia chinensis HOM05D001602 ORTHO05D001470 2.1e-21 105.1 63 73.0
MSTRG.6731 Avicennia marina HOM05D001602 ORTHO05D001470 2.1e-21 105.1 66 65.2
SGA_v2.0_scaffold70G23483 Striga asiatica HOM05D001602 ORTHO05D001470 2.8e-21 104.8 62 74.2
Dinv06852 Davidia involucrata HOM05D001602 ORTHO05D001470 3.6e-21 104.4 64 70.3
Migut.M00155 Erythranthe guttata HOM05D001602 ORTHO05D001470 3.6e-21 104.4 69 60.9
Sabra17G0013200 Salix brachista HOM05D001602 ORTHO05D001470 3.6e-21 104.4 65 70.8
ECA233G1090 Erigeron canadensis HOM05D000028 ORTHO05D000296 4.7e-21 104.0 64 67.2
PGR042G1519 Punica granatum HOM05D001602 ORTHO05D001470 4.7e-21 104.0 64 71.9
AUR62036061 Chenopodium quinoa HOM05D001602 ORTHO05D001470 6.2e-21 103.6 65 69.2
Glyma.12G207000 Glycine max HOM05D001602 ORTHO05D001470 8.1e-21 103.2 66 68.2
Lsat_1_v5_gn_8_136640 Lactuca sativa HOM05D001602 ORTHO05D001470 8.1e-21 103.2 64 67.2
Nitab4.5_0005191g0010 Nicotiana tabacum HOM05D001602 ORTHO05D001470 8.1e-21 103.2 66 68.2
Potri.017G017000 Populus trichocarpa HOM05D001602 ORTHO05D001470 8.1e-21 103.2 66 68.2
arahy.Tifrunner.gnm1.ann1.945Z0P Arachis hypogaea HOM05D001602 ORTHO05D001470 1.1e-20 102.8 66 68.2
arahy.Tifrunner.gnm1.ann1.HEJ2LC Arachis hypogaea HOM05D001602 ORTHO05D001470 1.1e-20 102.8 66 68.2
FAN02G2936 Fragaria x ananassa HOM05D001602 ORTHO05D001470 1.1e-20 102.8 57 80.7
Rhsim04G0071400 Rhododendron simsii HOM05D001602 ORTHO05D001470 1.1e-20 102.8 64 68.8
Lj3g0009490 Lotus japonicus HOM05D001602 ORTHO05D001470 1.4e-20 102.4 66 68.2
Lalb_Chr14g0367171 Lupinus albus HOM05D001602 ORTHO05D001470 1.8e-20 102.1 63 66.7
Solyc07g053580.3 Solanum lycopersicum HOM05D001602 ORTHO05D001470 2.4e-20 101.7 66 63.6
Sopen07g027530 Solanum pennellii HOM05D001602 ORTHO05D001470 2.4e-20 101.7 66 63.6
PGSC0003DMG400009398 Solanum tuberosum HOM05D001602 ORTHO05D001470 2.4e-20 101.7 66 63.6
CAN.G1808.4 Capsicum annuum HOM05D001602 ORTHO05D001470 3.1e-20 101.3 63 69.8
EL10Ac9g20821 Beta vulgaris HOM05D001602 ORTHO05D001470 5.2e-20 100.5 65 66.2
CDE02G2740 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 1.2e-19 99.4 64 67.2
HanXRQChr17g0555031 Helianthus annuus HOM05D001602 ORTHO05D001470 1.5e-19 99.0 64 64.1
Nitab4.5_0000621g0020 Nicotiana tabacum HOM05D001602 ORTHO05D001470 2.0e-19 98.6 66 65.2
ATR0602G270 Amborella trichopoda HOM05D001602 ORTHO05D001470 2.9e-18 94.7 63 63.5
Peaxi162Scf00845g00006 Petunia axillaris HOM05D001602 ORTHO05D001470 4.9e-18 94.0 58 65.5
arahy.Tifrunner.gnm1.ann1.CR36LG Arachis hypogaea HOM05D001602 ORTHO05D001470 1.1e-17 92.8 66 59.1
HPP92_023282 Vanilla planifolia HOM05D001602 ORTHO05D001470 1.1e-17 92.8 62 67.7
CSS0012391 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 3.2e-17 91.3 57 66.7
arahy.Tifrunner.gnm1.ann1.VMR70Y Arachis hypogaea HOM05D001602 ORTHO05D001470 5.4e-17 90.5 59 66.1
SMO196G0271 Selaginella moellendorffii HOM05D001602 ORTHO05D001470 1.3e-15 85.9 64 56.2
Prupe.4G174700 Prunus persica HOM05D001602 ORTHO05D001470 8.7e-15 83.2 67 61.2
CSS0029917 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 3.6e-13 77.8 64 60.9
Os05g0564100 Oryza sativa ssp. japonica HOM05D001602 ORTHO05D001470 8.1e-13 76.6 57 61.4
Nn4g24340 Nelumbo nucifera HOM05D001602 ORTHO05D001470 3.1e-12 74.7 49 67.3
Pp3c5_6170 Physcomitrium patens HOM05D001602 ORTHO05D001470 4.0e-12 74.3 64 43.8
Zm00001eb295880 Zea mays HOM05D001602 ORTHO05D001470 6.9e-12 73.6 65 55.4
arahy.Tifrunner.gnm1.ann1.G08S6A Arachis hypogaea HOM05D001602 ORTHO05D001470 5.8e-11 70.5 45 66.7
MBI06_g45914_MAGBIO Magnolia biondii HOM05D001602 ORTHO05D001470 9.9e-11 69.7 43 69.8
arahy.Tifrunner.gnm1.ann1.VD8F5Y Arachis hypogaea HOM05D001602 ORTHO05D001470 4.2e-09 64.3 49 55.1
Mapoly0012s0020 Marchantia polymorpha HOM05D001602 ORTHO05D001470 6.7e-07 57.0 64 37.5


User provided reference genes

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