Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014732 Carpinus fangiana HOM05D000788 ORTHO05D126275 7.2e-39 163.3 75 100.0
RcHm_v2.0_Chr7g0209091 Rosa chinensis HOM05D000788 ORTHO05D000947 4.8e-11 70.9 51 70.6
FvH4_5g21630 Fragaria vesca HOM05D000788 ORTHO05D000947 4.1e-10 67.8 51 66.7
FAN04G1744 Fragaria x ananassa HOM05D000788 ORTHO05D000947 4.1e-10 67.8 51 66.7
FAN13G1759 Fragaria x ananassa HOM05D000788 ORTHO05D000947 4.1e-10 67.8 51 66.7
FAN18G1800 Fragaria x ananassa HOM05D000788 ORTHO05D000947 4.1e-10 67.8 51 66.7
MD16G1277400 Malus domestica HOM05D000788 ORTHO05D000947 5.3e-10 67.4 44 77.3
Prupe.5G040900 Prunus persica HOM05D000788 ORTHO05D000947 5.3e-10 67.4 44 77.3
PGSC0003DMG400020517 Solanum tuberosum HOM05D000788 ORTHO05D000947 9.1e-10 66.6 57 61.4
CANSAT21G2517 Cannabis sativa HOM05D000788 ORTHO05D000947 1.2e-09 66.2 43 76.7
QL12p006252 Quercus lobata HOM05D000788 ORTHO05D000947 1.2e-09 66.2 44 75.0
FAN08G0614 Fragaria x ananassa HOM05D000788 ORTHO05D000947 2.0e-09 65.5 51 64.7
Haze_08269 Corylus avellana HOM05D000788 ORTHO05D000947 2.7e-09 65.1 57 52.6
Peaxi162Scf00102g00634 Petunia axillaris HOM05D000788 ORTHO05D000947 2.7e-09 65.1 54 63.0
ClCG10G001820 Citrullus lanatus HOM05D000788 ORTHO05D000947 4.5e-09 64.3 43 72.1
MELO3C013864.2 Cucumis melo HOM05D000788 ORTHO05D000947 4.5e-09 64.3 43 72.1
CsaV3_3G001890 Cucumis sativus L. HOM05D000788 ORTHO05D000947 4.5e-09 64.3 43 72.1
Dinv25199 Davidia involucrata HOM05D000788 ORTHO05D000947 4.5e-09 64.3 57 61.4
CiPaw.12G061700 Carya illinoinensis HOM05D000788 ORTHO05D000947 7.7e-09 63.5 45 71.1
Aqoxy3G02462 Aquilegia oxysepala HOM05D000788 ORTHO05D000947 1.0e-08 63.2 55 61.8
Cfa012409 Carpinus fangiana HOM05D000788 ORTHO05D000947 1.3e-08 62.8 57 50.9
Solyc08g007000.3 Solanum lycopersicum HOM05D000788 ORTHO05D000947 1.3e-08 62.8 57 59.6
Sopen08g002970 Solanum pennellii HOM05D000788 ORTHO05D000947 1.3e-08 62.8 57 59.6
Hma1.2p1_2232F.1_g317630 Hydrangea macrophylla HOM05D000788 ORTHO05D000947 1.7e-08 62.4 59 62.7
PSO063G4207 Papaver somniferum HOM05D000788 ORTHO05D000947 3.8e-08 61.2 49 63.3
PGSC0003DMG401017504 Solanum tuberosum HOM05D000788 ORTHO05D000947 3.8e-08 61.2 54 63.0
Lj2C243G5 Lonicera japonica HOM05D000788 ORTHO05D000947 5.0e-08 60.8 53 62.3
MD06G1031300 Malus domestica HOM05D000788 ORTHO05D000947 5.0e-08 60.8 44 70.5
Nn6g33631 Nelumbo nucifera HOM05D000788 ORTHO05D000947 6.5e-08 60.5 51 60.8
Cc08_g02410 Coffea canephora HOM05D000788 ORTHO05D000947 8.5e-08 60.1 44 70.5
Rhsim11G0012500 Rhododendron simsii HOM05D000788 ORTHO05D000947 8.5e-08 60.1 43 72.1
CSS0008704 Camellia sinensis var. sinensis HOM05D000788 ORTHO05D000947 1.5e-07 59.3 57 56.1
CiPaw.11G090900 Carya illinoinensis HOM05D000788 ORTHO05D000947 1.5e-07 59.3 45 68.9
Nitab4.5_0000049g0200 Nicotiana tabacum HOM05D000788 ORTHO05D000947 1.5e-07 59.3 54 61.1
Solyc08g077150.3 Solanum lycopersicum HOM05D000788 ORTHO05D000947 1.5e-07 59.3 54 61.1
Sopen08g025710 Solanum pennellii HOM05D000788 ORTHO05D000947 1.5e-07 59.3 54 61.1
Gohir.A12G209700 Gossypium hirsutum HOM05D000788 ORTHO05D000947 1.9e-07 58.9 44 63.6
Gohir.D12G212400 Gossypium hirsutum HOM05D000788 ORTHO05D000947 1.9e-07 58.9 44 63.6
Gorai.008G228000 Gossypium raimondii HOM05D000788 ORTHO05D000947 1.9e-07 58.9 44 63.6
COL.COLO4_17075 Corchorus olitorius HOM05D000788 ORTHO05D000947 2.5e-07 58.5 44 65.9
Atru.chr6.1756 Acer truncatum HOM05D000788 ORTHO05D000947 3.2e-07 58.2 58 56.9
Actinidia03387 Actinidia chinensis HOM05D000788 ORTHO05D000947 4.2e-07 57.8 44 68.2
PSO782G3159 Papaver somniferum HOM05D000788 ORTHO05D000947 5.5e-07 57.4 50 58.0
Potri.003G089500 Populus trichocarpa HOM05D000788 ORTHO05D000947 5.5e-07 57.4 58 56.9
Duzib084G0969 Durio zibethinus HOM05D000788 ORTHO05D000947 7.2e-07 57.0 43 60.5
Duzib205G0839 Durio zibethinus HOM05D000788 ORTHO05D000947 7.2e-07 57.0 44 63.6
TWI81G0652 Tripterygium wilfordii HOM05D000788 ORTHO05D000947 7.2e-07 57.0 60 48.3
Sed0006009 Sechium edule HOM05D000788 ORTHO05D000947 9.4e-07 56.6 60 51.7
Actinidia25950 Actinidia chinensis HOM05D000788 ORTHO05D000947 1.2e-06 56.2 53 60.4
SGA_v2.0_scaffold6G03191 Striga asiatica HOM05D000788 ORTHO05D000947 1.2e-06 56.2 57 52.6
vmacro00344 Vaccinium macrocarpon HOM05D000788 ORTHO05D000947 1.2e-06 56.2 52 61.5
arahy.Tifrunner.gnm1.ann1.HY94UM Arachis hypogaea HOM05D000788 ORTHO05D000947 1.6e-06 55.8 53 54.7
arahy.Tifrunner.gnm1.ann1.R8LTT2 Arachis hypogaea HOM05D000788 ORTHO05D000947 1.6e-06 55.8 53 54.7
Nitab4.5_0000535g0100 Nicotiana tabacum HOM05D000788 ORTHO05D000947 2.1e-06 55.5 63 50.8
Hund11265 Selenicereus undatus HOM05D000788 ORTHO05D000947 2.1e-06 55.5 60 53.3
Aa31LG9G15360 Aethionema arabicum HOM05D000788 ORTHO05D000947 2.7e-06 55.1 47 61.7
Sp4g17570 Schrenkiella parvula HOM05D000788 ORTHO05D000947 2.7e-06 55.1 52 59.6
ECA240G1086 Erigeron canadensis HOM05D000788 ORTHO05D000947 3.6e-06 54.7 43 67.4
BcaC02g11636 Brassica carinata HOM05D000788 ORTHO05D000947 4.7e-06 54.3 43 65.1
C04p12850 Brassica napus HOM05D000788 ORTHO05D000947 4.7e-06 54.3 43 65.1
BolC4t22929H Brassica oleracea HOM05D000788 ORTHO05D000947 4.7e-06 54.3 43 65.1
BraA05t19982Z Brassica rapa HOM05D000788 ORTHO05D000947 4.7e-06 54.3 43 65.1
Thhalv10016260m.g Eutrema salsugineum HOM05D000788 ORTHO05D000947 4.7e-06 54.3 43 65.1
Lsat_1_v5_gn_6_64820 Lactuca sativa HOM05D000788 ORTHO05D000947 4.7e-06 54.3 45 66.7
Nitab4.5_0000804g0030 Nicotiana tabacum HOM05D000788 ORTHO05D000947 4.7e-06 54.3 63 50.8
PGR031G3200 Punica granatum HOM05D000788 ORTHO05D000947 4.7e-06 54.3 47 63.8
Ah.12g054690 Amaranthus hybridus HOM05D000788 ORTHO05D000947 6.1e-06 53.9 53 54.7
arahy.Tifrunner.gnm1.ann1.W2G52I Arachis hypogaea HOM05D000788 ORTHO05D000947 6.1e-06 53.9 54 55.6
CSS0007114 Camellia sinensis var. sinensis HOM05D000788 ORTHO05D000947 6.1e-06 53.9 57 54.4
CSS0043517 Camellia sinensis var. sinensis HOM05D000788 ORTHO05D000947 6.1e-06 53.9 57 54.4
Hund14416 Selenicereus undatus HOM05D000788 ORTHO05D000947 6.1e-06 53.9 54 53.7
Thecc.03G231200 Theobroma cacao HOM05D000788 ORTHO05D000947 6.1e-06 53.9 43 60.5


User provided reference genes

Program Settings