Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.3e-273 943.7 468 100.0
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 8.5e-223 776.9 497 82.1
Cfa002005 Carpinus fangiana HOM05D003991 ORTHO05D009743 5.2e-111 405.6 318 68.2
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 2.9e-61 240.4 322 45.0
Cfa002004 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.5e-51 206.8 176 73.9
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 6.0e-51 206.1 352 36.9
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-50 204.9 413 35.4
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 5.1e-50 203.0 404 35.9
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.0e-47 192.2 326 37.4
Haze_19940 Corylus avellana HOM05D008391 ORTHO05D009743 2.6e-46 190.7 329 38.9
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-42 178.7 329 36.2
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-42 177.9 361 34.1
Cfa015317 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-39 168.3 546 28.8
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 5.8e-38 162.9 374 32.9
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 5.8e-38 162.9 374 32.9
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.7e-37 161.4 246 39.0
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-36 158.7 270 35.9
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 1.4e-36 158.3 353 32.0
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-36 157.5 313 34.8
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 9.3e-36 155.6 347 32.9
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-34 152.1 258 37.2
Cfa017751 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-34 151.8 323 33.1
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 2.3e-34 151.0 275 36.7
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 6.7e-34 149.4 319 33.9
Haze_19842 Corylus avellana HOM05D008391 ORTHO05D009743 7.4e-33 146.0 280 35.0
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 3.1e-31 140.6 358 31.0
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.3e-31 139.8 212 40.6
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.0e-31 139.0 324 30.9
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 9.0e-31 139.0 264 35.2
Cfa017030 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-29 135.2 323 31.3
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 3.8e-29 133.7 257 34.6
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.5e-29 132.9 354 28.2
Haze_21168 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-28 132.1 256 33.2
Cfa003685 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.2e-28 129.4 323 30.3
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 1.6e-27 128.3 220 37.3
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 3.9e-26 123.6 310 31.0
Cfa016864 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.3e-25 120.2 195 39.0
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 5.7e-25 119.8 220 35.5
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-22 110.2 273 30.4
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-22 110.2 273 30.4
Cfa016660 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.9e-22 109.8 167 37.7
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 5.9e-22 109.8 168 41.7
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.0e-21 106.7 313 29.4
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-20 105.5 345 26.4
Cfa005104 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-20 104.4 329 28.3
Cfa016862 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.2e-20 104.0 218 34.4
Cfa007250 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.4e-20 102.4 280 30.0
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-19 102.1 298 29.5
Cfa017076 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.6e-19 101.7 324 27.5
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 2.7e-19 100.9 376 26.3
Cfa016758 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.6e-19 100.5 122 42.6
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.0e-18 99.0 371 26.1
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-18 98.2 165 37.0
Haze_13848 Corylus avellana HOM05D008391 ORTHO05D009743 5.1e-18 96.7 218 30.3
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 8.8e-18 95.9 213 33.3
Cfa016866 Carpinus fangiana HOM05D027064 ORTHO05D009743 1.1e-17 95.5 263 28.1
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 3.3e-17 94.0 207 32.9
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 9.7e-17 92.4 262 29.4
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-15 88.2 220 31.8
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 5.3e-15 86.7 222 29.7
Haze_13950 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-14 85.1 106 45.3
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 2.0e-14 84.7 248 28.6
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-14 84.7 214 29.9
Cfa003301 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.4e-14 84.0 344 24.1
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 5.9e-14 83.2 259 27.0
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-13 82.4 273 27.1
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-13 82.4 273 26.7
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 1.7e-13 81.6 250 27.2
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-13 81.3 273 26.7
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-13 81.3 169 33.7
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 2.9e-13 80.9 232 28.0
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 2.9e-13 80.9 232 28.0
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 5.0e-13 80.1 250 26.4
Haze_19846 Corylus avellana HOM05D027064 ORTHO05D009743 8.5e-13 79.3 167 32.9
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.5e-13 79.3 238 27.7
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.5e-13 79.3 238 27.7
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.5e-13 79.3 238 27.7
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.4e-12 78.6 253 28.1
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-12 77.8 263 25.5
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 3.2e-12 77.4 250 26.4
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 4.2e-12 77.0 211 28.0
Cfa020074 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.2e-12 77.0 70 47.1
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 4.2e-12 77.0 237 27.4
QL11p038513 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-12 77.0 188 31.4
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.2e-12 77.0 238 27.3
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 5.5e-12 76.6 160 31.9
Cfa007135 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.2e-12 76.3 196 30.6
CAN.G767.7 Capsicum annuum HOM05D000249 ORTHO05D000206 1.0e-10 72.4 211 27.0
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 1.4e-10 72.0 255 25.5
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 1.4e-10 72.0 216 30.1
Haze_14976 Corylus avellana HOM05D001643 ORTHO05D001580 1.8e-10 71.6 120 36.7
Rhsim06G0070500 Rhododendron simsii HOM05D018081 ORTHO05D026100 2.3e-10 71.2 259 30.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 3.9e-10 70.5 140 30.7
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 3.9e-10 70.5 205 26.8
BolC9t59948H Brassica oleracea HOM05D000249 ORTHO05D000206 5.1e-10 70.1 233 23.6
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 8.8e-10 69.3 211 26.5
Nitab4.5_0000904g0030 Nicotiana tabacum HOM05D000249 ORTHO05D000206 1.1e-09 68.9 211 26.1
C03p78240 Brassica napus HOM05D000249 ORTHO05D000206 1.5e-09 68.6 235 26.0
BolC3t20082H Brassica oleracea HOM05D000249 ORTHO05D000206 1.5e-09 68.6 235 26.0
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 2.0e-09 68.2 173 30.1
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 3.3e-09 67.4 148 31.1
A08p23390 Brassica napus HOM05D000249 ORTHO05D000206 5.7e-09 66.6 238 25.6
BraA08t34293Z Brassica rapa HOM05D000249 ORTHO05D000206 5.7e-09 66.6 238 25.6
Solyc04g051870.3 Solanum lycopersicum HOM05D000249 ORTHO05D000206 5.7e-09 66.6 211 26.1
Sopen04g023200 Solanum pennellii HOM05D000249 ORTHO05D000206 5.7e-09 66.6 211 26.1
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 7.4e-09 66.2 144 28.5
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 7.4e-09 66.2 97 41.2
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 2.2e-08 64.7 179 29.6
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 2.2e-08 64.7 179 29.6
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 4.8e-08 63.5 227 28.2
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 4.8e-08 63.5 173 29.5
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 6.3e-08 63.2 189 27.5
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 8.2e-08 62.8 126 34.1
Cfa007193 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-07 62.0 233 23.6
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 3.1e-07 60.8 135 30.4
Haze_24274 Corylus avellana HOM05D008391 ORTHO05D009743 5.3e-07 60.1 308 24.4
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 7.0e-07 59.7 131 28.2
MSTRG.23312 Avicennia marina HOM05D000249 ORTHO05D000206 1.2e-06 58.9 135 32.6
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 2.6e-06 57.8 130 30.0
PSO541G4415 Papaver somniferum HOM05D000249 ORTHO05D000206 3.5e-06 57.4 217 24.0
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.5e-06 57.4 204 27.0
CANSAT56G2419 Cannabis sativa HOM05D000249 ORTHO05D000206 4.5e-06 57.0 222 24.8


User provided reference genes

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