Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 0.0e+00 1716.8 893 100.0
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 0.0e+00 1338.2 830 84.5
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 1.2e-244 850.5 878 57.6
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 6.3e-174 615.5 906 44.8
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 4.4e-151 539.7 919 39.8
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 1.8e-133 481.1 920 37.7
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 2.2e-126 457.6 913 37.0
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 3.3e-122 443.7 911 35.5
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 8.1e-121 439.1 904 37.1
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 2.3e-120 437.6 719 40.6
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 1.2e-119 435.3 899 36.6
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 3.3e-114 417.2 905 35.6
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 4.6e-108 396.7 904 35.0
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 2.3e-99 367.9 722 35.5
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 5.1e-91 340.1 796 33.3
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 6.4e-86 323.2 791 33.4
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 5.1e-83 313.5 646 37.6
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 1.5e-82 312.0 935 29.9
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 1.3e-81 308.9 459 40.3
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 8.4e-78 296.2 541 35.7
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 2.5e-77 294.7 764 32.5
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 3.0e-75 287.7 317 46.7
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 1.1e-74 285.8 372 44.1
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 7.4e-74 283.1 295 47.8
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 9.6e-74 282.7 317 46.4
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 1.3e-73 282.3 906 28.1
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 4.8e-73 280.4 302 47.7
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 4.8e-73 280.4 304 47.0
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 6.3e-73 280.0 839 29.2
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 2.4e-72 278.1 304 46.7
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 2.4e-72 278.1 304 46.7
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 2.4e-72 278.1 507 35.9
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 9.0e-72 276.2 531 38.0
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.5e-71 275.4 729 32.0
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 2.0e-71 275.0 893 29.5
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 2.6e-71 274.6 317 47.9
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 8.4e-70 269.6 454 38.5
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 1.4e-69 268.9 290 47.6
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 9.3e-69 266.2 450 38.2
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 1.2e-68 265.8 375 42.4
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 3.9e-67 260.8 855 28.9
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 7.7e-63 246.5 444 36.9
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 3.3e-58 231.1 289 46.4
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 5.3e-56 223.8 226 50.4
Gorai.011G175900 Gossypium raimondii HOM05D008307 ORTHO05D010374 2.5e-53 214.9 451 34.8
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 3.9e-51 207.6 303 41.3
Gohir.D10G155880 Gossypium hirsutum HOM05D008307 ORTHO05D010374 1.1e-48 199.5 459 33.3
Thecc.04G258000 Theobroma cacao HOM05D008307 ORTHO05D010374 2.4e-48 198.4 231 49.4
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 5.9e-47 193.7 304 37.5
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 1.4e-35 156.0 155 49.7
Cc03_g05700 Coffea canephora HOM05D008307 ORTHO05D010374 9.1e-32 143.3 839 25.4
Haze_11404 Corylus avellana HOM05D008307 ORTHO05D010374 1.7e-22 112.5 67 91.0
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.3e-22 112.1 387 24.5
GSVIVG01027843001 Vitis vinifera HOM05D008307 ORTHO05D010374 2.3e-22 112.1 245 34.7
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.1e-20 105.5 335 25.7
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 6.1e-20 104.0 304 28.6
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 1.0e-19 103.2 346 27.5
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 9.8e-18 96.7 217 29.5
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 1.1e-16 93.2 369 24.9
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 7.8e-15 87.0 182 28.6
Thecc.04G258100 Theobroma cacao HOM05D008307 ORTHO05D010374 2.3e-11 75.5 65 49.2
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 3.4e-10 71.6 106 36.8
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 4.9e-09 67.8 145 30.3
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 3.9e-06 58.2 114 29.8


User provided reference genes

Program Settings