Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 1.5e-37 159.1 84 100.0
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 5.9e-34 147.1 85 94.1
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 2.1e-10 68.9 83 53.0
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 2.7e-10 68.6 80 55.0
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 3.0e-09 65.1 83 50.6
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 5.1e-09 64.3 83 49.4
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 8.7e-09 63.5 84 54.8
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 1.1e-08 63.2 83 49.4
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 1.5e-08 62.8 83 54.2
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 1.5e-08 62.8 83 54.2
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 1.5e-08 62.8 83 54.2
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 1.9e-08 62.4 84 54.8
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 3.3e-08 61.6 83 48.2
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 4.3e-08 61.2 82 47.6
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 4.3e-08 61.2 83 48.2
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 4.3e-08 61.2 83 48.2
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 4.3e-08 61.2 83 48.2
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 5.6e-08 60.8 83 50.6
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 7.3e-08 60.5 81 45.7
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 9.6e-08 60.1 83 48.2
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 9.6e-08 60.1 83 47.0
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 9.6e-08 60.1 83 48.2
Sabra13G0100400 Salix brachista HOM05D008879 ORTHO05D010552 1.2e-07 59.7 63 49.2
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.6e-07 59.3 83 50.6
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 1.6e-07 59.3 83 48.2
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 1.6e-07 59.3 82 42.7
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 2.8e-07 58.5 78 44.9
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 3.6e-07 58.2 83 45.8
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 3.6e-07 58.2 83 45.8
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 3.6e-07 58.2 83 45.8
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 3.6e-07 58.2 78 50.0
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 6.2e-07 57.4 83 48.2
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.1e-06 56.6 83 48.2
Cfa014709 Carpinus fangiana HOM05D024358 ORTHO05D024888 1.4e-06 56.2 80 42.5
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 1.8e-06 55.8 83 47.0
Duzib147G0511 Durio zibethinus HOM05D002374 ORTHO05D010552 2.4e-06 55.5 63 46.0
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 3.1e-06 55.1 83 48.2
COL.COLO4_17611 Corchorus olitorius HOM05D017499 ORTHO05D010552 3.1e-06 55.1 60 50.0
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 5.2e-06 54.3 82 45.1
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 5.2e-06 54.3 82 45.1
QL05p044725 Quercus lobata HOM05D019009 ORTHO05D013262 6.9e-06 53.9 84 41.7
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 6.9e-06 53.9 82 41.5
CSS0029563 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 9.0e-06 53.5 84 42.9
CSS0045732 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 9.0e-06 53.5 84 42.9


User provided reference genes

Program Settings